Detail information of GWHGAAZE013985


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDY16891.12.20307E-21BnaC09g40180D [Brassica napus]
Swissprottr|Q9ZNT1|NB5R1_ARATH2E-23NADH--cytochrome b5 reductase 1
trEMBLtr|A0A078FV94|A0A078FV94_BRANA8E-22BnaC09g40180D protein {ECO:0000313|EMBL:CDY16891.1}
TAIR10AT5G17770.14E-19NADH:cytochrome B5 reductase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene39900023990136-
GWHAAZE00000004mRNA39900023990136-
GWHAAZE00000004exon39900023990136-
GWHAAZE00000004CDS39900023990136-
Transcript Sequence

Network for GWHGAAZE013985

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00326E1.6.2.2 Amino sugar and nucleotide sugar metabolism map00520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.743
SRR3591706second leaf18.752
SRR3591707mature leaf9.161
SRR3591708Shoot apex21.657
SRR3591709Stem35.542
SRR3591710White floral bud7.327
SRR3591711White flower8.375
SRR3591712Green floral bud13.821
SRR3591713Yellow flower5.890
SRP173429 SRR8316895Juvenile bud stage 2.018
SRR8316896Juvenile bud stage 3.562
SRR8316897Juvenile bud stage 2.073
SRR8316894Third green stage 1.432
SRR8316900Third green stage 2.234
SRR8316901Third green stage 4.539
SRR8316898Complete white stage 1.279
SRR8316899Complete white stage 3.207
SRR8316903Complete white stage 1.762
SRR8316902Silver flowering stage0.400
SRR8316904Silver flowering stage1.217
SRR8316905Silver flowering stage0.427
SRR8316906Gold flowering stage 1.077
SRR8316907Gold flowering stage 1.135
SRR8316908Gold flowering stage 1.793
SRP132670SRR6706286Control1.342
SRR6706287Light intensity 50%1.352
SRR6706288Light intensity 20%1.797
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.007
CNS0095593Slightly white alabastrum(diploid) 27.378
CNS0095594Slightly white alabastrum(diploid) 37.261
CNS0095595Whole white alabastrum(diploid) 24.645
CNS0095596Whole white alabastrum(diploid) 34.348
CNS0095597Whole white alabastrum(diploid) 43.374
CNS0095598Silvery flower (diploied) 12.993
CNS0095599Silvery flower (diploied) 21.501
CNS0095600Silvery flower (diploied) 31.634
CNS0095601Golden flower (diploid) 11.611
CNS0095602Golden flower (diploid) 22.018
CNS0095603Golden flower (diploid) 31.667
CNS0095604Slightly white alabastrum(tetraploid) 19.702
CNS0095605Slightly white alabastrum(tetraploid) 28.677
CNS0095606Slightly white alabastrum(tetraploid) 312.131
CNS0095607Whole white alabastrum(tetraploid) 17.929
CNS0095608Whole white alabastrum(tetraploid) 25.981
CNS0095609Whole white alabastrum(tetraploid) 35.672
CNS0095610Silvery flower (tetraploid) 13.071
CNS0095611Silvery flower (tetraploid) 23.148
CNS0095612Silvery flower (tetraploid) 32.103
CNS0095613Golden flower (tetraploid) 13.880
CNS0095614Golden flower (tetraploid) 23.215
CNS0095615Golden flower (tetraploid) 31.211
CRA001975CRR073297Stem 11.639
CRR073298Stem 21.989
CRR073299Stem 31.880
CRR073300Leaf 12.552
CRR073301Leaf 22.023
CRR073302Leaf 31.731
CRR073303Juvenile bud 11.723
CRR073304Juvenile bud 22.555
CRR073305Juvenile bud 31.410
CRR073306Third green 10.395
CRR073307Third green 20.746
CRR073308Third green 30.545
CRR073309Second white 10.889
CRR073310Second white 20.530
CRR073311Second white 30.127
CRR073312Silver flowering 11.301
CRR073313Silver flowering 20.646
CRR073314Silver flowering 31.735
CRR073315Gold flowering 12.286
CRR073316Gold flowering 20.606
CRR073317Gold flowering 30.217
CRR073318Tawny withering 12.236
CRR073319Tawny withering 23.159
CRR073320Tawny withering 34.948