Detail information of GWHGAAZE014107


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAED99877.10cytochrome P450 [Panax notoginseng]
Swissprottr|Q9LJK2|ABAH4_ARATH0Abscisic acid 8'-hydroxylase 4
trEMBLtr|F4YF81|F4YF81_9APIA0Cytochrome P450 {ECO:0000313|EMBL:AED99877.1}
TAIR10AT3G19270.15E-162cytochrome P450, family 707, subfamily A, polypeptide 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene58508145854297-
GWHAAZE00000004mRNA58508145854297-
GWHAAZE00000004exon58541095854297-
GWHAAZE00000004exon58536775853999-
GWHAAZE00000004exon58526835852832-
GWHAAZE00000004exon58523365852584-
GWHAAZE00000004exon58521345852223-
GWHAAZE00000004exon58519605852038-
GWHAAZE00000004exon58516365851742-
GWHAAZE00000004exon58513555851473-
GWHAAZE00000004exon58508145850913-
GWHAAZE00000004five_prime_UTR58541095854297-
GWHAAZE00000004five_prime_UTR58539565853999-
GWHAAZE00000004CDS58536775853955-
GWHAAZE00000004CDS58526835852832-
GWHAAZE00000004CDS58523365852584-
GWHAAZE00000004CDS58521345852223-
GWHAAZE00000004CDS58519605852038-
GWHAAZE00000004CDS58516365851742-
GWHAAZE00000004CDS58513555851473-
GWHAAZE00000004CDS58508145850913-
Transcript Sequence

Network for GWHGAAZE014107

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0192


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p45023631.60E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09843CYP707A Carotenoid biosynthesis map00906

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.544
SRR3591706second leaf0.131
SRR3591707mature leaf0.084
SRR3591708Shoot apex3.316
SRR3591709Stem3.835
SRR3591710White floral bud10.449
SRR3591711White flower33.607
SRR3591712Green floral bud1.703
SRR3591713Yellow flower17.501
SRP173429 SRR8316895Juvenile bud stage 0.152
SRR8316896Juvenile bud stage 0.529
SRR8316897Juvenile bud stage 0.373
SRR8316894Third green stage 0.246
SRR8316900Third green stage 0.177
SRR8316901Third green stage 1.049
SRR8316898Complete white stage 4.239
SRR8316899Complete white stage 4.061
SRR8316903Complete white stage 6.457
SRR8316902Silver flowering stage1.930
SRR8316904Silver flowering stage2.960
SRR8316905Silver flowering stage0.739
SRR8316906Gold flowering stage 1.267
SRR8316907Gold flowering stage 1.285
SRR8316908Gold flowering stage 38.015
SRP132670SRR6706286Control1.004
SRR6706287Light intensity 50%0.863
SRR6706288Light intensity 20%0.786
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.078
CNS0095593Slightly white alabastrum(diploid) 20.277
CNS0095594Slightly white alabastrum(diploid) 30.449
CNS0095595Whole white alabastrum(diploid) 20.664
CNS0095596Whole white alabastrum(diploid) 30.466
CNS0095597Whole white alabastrum(diploid) 40.683
CNS0095598Silvery flower (diploied) 10.348
CNS0095599Silvery flower (diploied) 24.157
CNS0095600Silvery flower (diploied) 34.243
CNS0095601Golden flower (diploid) 10.516
CNS0095602Golden flower (diploid) 20.929
CNS0095603Golden flower (diploid) 30.705
CNS0095604Slightly white alabastrum(tetraploid) 10.775
CNS0095605Slightly white alabastrum(tetraploid) 20.666
CNS0095606Slightly white alabastrum(tetraploid) 30.890
CNS0095607Whole white alabastrum(tetraploid) 10.992
CNS0095608Whole white alabastrum(tetraploid) 22.115
CNS0095609Whole white alabastrum(tetraploid) 31.022
CNS0095610Silvery flower (tetraploid) 114.151
CNS0095611Silvery flower (tetraploid) 24.211
CNS0095612Silvery flower (tetraploid) 31.067
CNS0095613Golden flower (tetraploid) 14.122
CNS0095614Golden flower (tetraploid) 20.816
CNS0095615Golden flower (tetraploid) 30.187
CRA001975CRR073297Stem 10.162
CRR073298Stem 20.109
CRR073299Stem 30.193
CRR073300Leaf 10.140
CRR073301Leaf 20.289
CRR073302Leaf 30.258
CRR073303Juvenile bud 10.851
CRR073304Juvenile bud 20.956
CRR073305Juvenile bud 30.203
CRR073306Third green 10.323
CRR073307Third green 20.327
CRR073308Third green 30.230
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.141
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.041
CRR073314Silver flowering 30.048
CRR073315Gold flowering 10.164
CRR073316Gold flowering 20.265
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.497
CRR073319Tawny withering 20.114
CRR073320Tawny withering 30.413