Detail information of GWHGAAZE014108


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAED99877.10cytochrome P450 [Panax notoginseng]
Swissprottr|Q9LJK2|ABAH4_ARATH0Abscisic acid 8'-hydroxylase 4
trEMBLtr|F4YF81|F4YF81_9APIA0Cytochrome P450 {ECO:0000313|EMBL:AED99877.1}
TAIR10AT3G19270.10cytochrome P450, family 707, subfamily A, polypeptide 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene58955005898995-
GWHAAZE00000004mRNA58955005898995-
GWHAAZE00000004exon58987975898995-
GWHAAZE00000004exon58985215898687-
GWHAAZE00000004exon58983645898452-
GWHAAZE00000004exon58973445897493-
GWHAAZE00000004exon58969955897243-
GWHAAZE00000004exon58967935896882-
GWHAAZE00000004exon58966195896697-
GWHAAZE00000004exon58963855896491-
GWHAAZE00000004exon58961025896220-
GWHAAZE00000004exon58955005895599-
GWHAAZE00000004five_prime_UTR58989645898995-
GWHAAZE00000004CDS58987975898963-
GWHAAZE00000004CDS58985215898687-
GWHAAZE00000004CDS58983645898452-
GWHAAZE00000004CDS58973445897493-
GWHAAZE00000004CDS58969955897243-
GWHAAZE00000004CDS58967935896882-
GWHAAZE00000004CDS58966195896697-
GWHAAZE00000004CDS58963855896491-
GWHAAZE00000004CDS58961025896220-
GWHAAZE00000004CDS58955005895599-
Transcript Sequence

Network for GWHGAAZE014108

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p45026972.00E-06
PF00067.23p4501134091.20E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09843CYP707A Carotenoid biosynthesis map00906

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0004497molecular_functionmonooxygenase activity
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.541
SRR3591706second leaf1.287
SRR3591707mature leaf5.197
SRR3591708Shoot apex18.203
SRR3591709Stem13.095
SRR3591710White floral bud37.215
SRR3591711White flower42.288
SRR3591712Green floral bud7.550
SRR3591713Yellow flower4.187
SRP173429 SRR8316895Juvenile bud stage 5.494
SRR8316896Juvenile bud stage 7.187
SRR8316897Juvenile bud stage 3.456
SRR8316894Third green stage 2.639
SRR8316900Third green stage 3.571
SRR8316901Third green stage 5.186
SRR8316898Complete white stage 4.818
SRR8316899Complete white stage 14.963
SRR8316903Complete white stage 10.907
SRR8316902Silver flowering stage1.022
SRR8316904Silver flowering stage2.072
SRR8316905Silver flowering stage0.505
SRR8316906Gold flowering stage 0.403
SRR8316907Gold flowering stage 1.042
SRR8316908Gold flowering stage 10.790
SRP132670SRR6706286Control6.375
SRR6706287Light intensity 50%7.633
SRR6706288Light intensity 20%8.268
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.515
CNS0095593Slightly white alabastrum(diploid) 211.609
CNS0095594Slightly white alabastrum(diploid) 37.811
CNS0095595Whole white alabastrum(diploid) 26.610
CNS0095596Whole white alabastrum(diploid) 34.416
CNS0095597Whole white alabastrum(diploid) 44.586
CNS0095598Silvery flower (diploied) 115.580
CNS0095599Silvery flower (diploied) 29.415
CNS0095600Silvery flower (diploied) 35.576
CNS0095601Golden flower (diploid) 110.496
CNS0095602Golden flower (diploid) 27.950
CNS0095603Golden flower (diploid) 39.406
CNS0095604Slightly white alabastrum(tetraploid) 113.065
CNS0095605Slightly white alabastrum(tetraploid) 27.927
CNS0095606Slightly white alabastrum(tetraploid) 330.079
CNS0095607Whole white alabastrum(tetraploid) 18.413
CNS0095608Whole white alabastrum(tetraploid) 23.779
CNS0095609Whole white alabastrum(tetraploid) 37.728
CNS0095610Silvery flower (tetraploid) 15.707
CNS0095611Silvery flower (tetraploid) 29.384
CNS0095612Silvery flower (tetraploid) 32.262
CNS0095613Golden flower (tetraploid) 13.519
CNS0095614Golden flower (tetraploid) 25.751
CNS0095615Golden flower (tetraploid) 30.199
CRA001975CRR073297Stem 12.711
CRR073298Stem 23.990
CRR073299Stem 33.631
CRR073300Leaf 15.387
CRR073301Leaf 24.995
CRR073302Leaf 33.557
CRR073303Juvenile bud 15.289
CRR073304Juvenile bud 26.379
CRR073305Juvenile bud 36.128
CRR073306Third green 10.486
CRR073307Third green 21.145
CRR073308Third green 31.205
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.002
CRR073313Silver flowering 20.184
CRR073314Silver flowering 30.000
CRR073315Gold flowering 110.589
CRR073316Gold flowering 211.512
CRR073317Gold flowering 314.752
CRR073318Tawny withering 125.019
CRR073319Tawny withering 28.623
CRR073320Tawny withering 321.530