Detail information of GWHGAAZE014118


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006434726.14.7986E-100hypothetical protein CICLE_v10002438mg [Citrus clementina]
Swissprottr|Q6X7J9|WOX4_ARATH6E-71WUSCHEL-related homeobox 4
trEMBLtr|V4TE66|V4TE66_9ROSI2E-100Uncharacterized protein {ECO:0000313|EMBL:ESR47966.1}
TAIR10AT1G46480.12E-55WUSCHEL related homeobox 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene61909526192276-
GWHAAZE00000004mRNA61909526192276-
GWHAAZE00000004exon61909526190990-
GWHAAZE00000004exon61912046191485-
GWHAAZE00000004exon61916296191925-
GWHAAZE00000004exon61920766192276-
GWHAAZE00000004CDS61920766192276-
GWHAAZE00000004CDS61916296191925-
GWHAAZE00000004CDS61912046191485-
GWHAAZE00000004CDS61909526190990-
Transcript Sequence

Network for GWHGAAZE014118

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00046.30Homeodomain751347.40E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyHB-WOX

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf55.921
SRR3591706second leaf2.814
SRR3591707mature leaf1.960
SRR3591708Shoot apex12.762
SRR3591709Stem30.461
SRR3591710White floral bud0.703
SRR3591711White flower2.461
SRR3591712Green floral bud0.112
SRR3591713Yellow flower0.574
SRP173429 SRR8316895Juvenile bud stage 0.260
SRR8316896Juvenile bud stage 0.160
SRR8316897Juvenile bud stage 0.131
SRR8316894Third green stage 0.068
SRR8316900Third green stage 0.477
SRR8316901Third green stage 0.217
SRR8316898Complete white stage 0.237
SRR8316899Complete white stage 0.394
SRR8316903Complete white stage 0.250
SRR8316902Silver flowering stage1.643
SRR8316904Silver flowering stage1.506
SRR8316905Silver flowering stage0.772
SRR8316906Gold flowering stage 1.986
SRR8316907Gold flowering stage 1.909
SRR8316908Gold flowering stage 1.676
SRP132670SRR6706286Control1.376
SRR6706287Light intensity 50%0.992
SRR6706288Light intensity 20%1.032
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.293
CNS0095593Slightly white alabastrum(diploid) 20.258
CNS0095594Slightly white alabastrum(diploid) 30.337
CNS0095595Whole white alabastrum(diploid) 20.349
CNS0095596Whole white alabastrum(diploid) 30.256
CNS0095597Whole white alabastrum(diploid) 40.697
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.381
CNS0095600Silvery flower (diploied) 31.345
CNS0095601Golden flower (diploid) 10.574
CNS0095602Golden flower (diploid) 20.923
CNS0095603Golden flower (diploid) 30.296
CNS0095604Slightly white alabastrum(tetraploid) 10.081
CNS0095605Slightly white alabastrum(tetraploid) 20.195
CNS0095606Slightly white alabastrum(tetraploid) 31.526
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.080
CNS0095609Whole white alabastrum(tetraploid) 30.471
CNS0095610Silvery flower (tetraploid) 12.742
CNS0095611Silvery flower (tetraploid) 20.599
CNS0095612Silvery flower (tetraploid) 30.434
CNS0095613Golden flower (tetraploid) 10.060
CNS0095614Golden flower (tetraploid) 20.759
CNS0095615Golden flower (tetraploid) 30.753
CRA001975CRR073297Stem 10.629
CRR073298Stem 20.444
CRR073299Stem 32.630
CRR073300Leaf 10.574
CRR073301Leaf 21.289
CRR073302Leaf 31.385
CRR073303Juvenile bud 11.129
CRR073304Juvenile bud 22.911
CRR073305Juvenile bud 32.329
CRR073306Third green 13.767
CRR073307Third green 22.774
CRR073308Third green 33.027
CRR073309Second white 10.738
CRR073310Second white 20.968
CRR073311Second white 30.383
CRR073312Silver flowering 10.396
CRR073313Silver flowering 20.076
CRR073314Silver flowering 31.265
CRR073315Gold flowering 13.532
CRR073316Gold flowering 21.799
CRR073317Gold flowering 31.380
CRR073318Tawny withering 193.282
CRR073319Tawny withering 229.417
CRR073320Tawny withering 388.387