Detail information of GWHGAAZE014120


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002282947.20PREDICTED: uncharacterized protein LOC100248940 [Vitis vinifera]
trEMBLtr|F6H1A7|F6H1A7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB45816.1}
TAIR10AT5G52010.11E-124C2H2-like zinc finger protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene62393836240624-
GWHAAZE00000004mRNA62393836240624-
GWHAAZE00000004exon62393836240624-
GWHAAZE00000004CDS62393836240624-
Transcript Sequence

Network for GWHGAAZE014120

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.277
SRR3591706second leaf22.783
SRR3591707mature leaf25.716
SRR3591708Shoot apex20.520
SRR3591709Stem9.952
SRR3591710White floral bud12.825
SRR3591711White flower15.273
SRR3591712Green floral bud14.401
SRR3591713Yellow flower7.787
SRP173429 SRR8316895Juvenile bud stage 8.333
SRR8316896Juvenile bud stage 13.587
SRR8316897Juvenile bud stage 5.445
SRR8316894Third green stage 4.259
SRR8316900Third green stage 14.381
SRR8316901Third green stage 14.211
SRR8316898Complete white stage 5.468
SRR8316899Complete white stage 15.072
SRR8316903Complete white stage 7.102
SRR8316902Silver flowering stage3.388
SRR8316904Silver flowering stage5.894
SRR8316905Silver flowering stage3.619
SRR8316906Gold flowering stage 9.509
SRR8316907Gold flowering stage 7.853
SRR8316908Gold flowering stage 11.386
SRP132670SRR6706286Control21.140
SRR6706287Light intensity 50%19.281
SRR6706288Light intensity 20%17.411
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.904
CNS0095593Slightly white alabastrum(diploid) 211.207
CNS0095594Slightly white alabastrum(diploid) 318.664
CNS0095595Whole white alabastrum(diploid) 213.804
CNS0095596Whole white alabastrum(diploid) 316.068
CNS0095597Whole white alabastrum(diploid) 412.315
CNS0095598Silvery flower (diploied) 112.932
CNS0095599Silvery flower (diploied) 29.787
CNS0095600Silvery flower (diploied) 313.742
CNS0095601Golden flower (diploid) 113.882
CNS0095602Golden flower (diploid) 217.829
CNS0095603Golden flower (diploid) 316.815
CNS0095604Slightly white alabastrum(tetraploid) 120.611
CNS0095605Slightly white alabastrum(tetraploid) 221.987
CNS0095606Slightly white alabastrum(tetraploid) 323.683
CNS0095607Whole white alabastrum(tetraploid) 112.833
CNS0095608Whole white alabastrum(tetraploid) 210.426
CNS0095609Whole white alabastrum(tetraploid) 317.170
CNS0095610Silvery flower (tetraploid) 118.111
CNS0095611Silvery flower (tetraploid) 223.783
CNS0095612Silvery flower (tetraploid) 310.151
CNS0095613Golden flower (tetraploid) 17.437
CNS0095614Golden flower (tetraploid) 218.689
CNS0095615Golden flower (tetraploid) 39.424
CRA001975CRR073297Stem 116.872
CRR073298Stem 219.513
CRR073299Stem 320.968
CRR073300Leaf 117.115
CRR073301Leaf 215.664
CRR073302Leaf 317.277
CRR073303Juvenile bud 114.960
CRR073304Juvenile bud 214.368
CRR073305Juvenile bud 318.321
CRR073306Third green 14.314
CRR073307Third green 22.662
CRR073308Third green 33.920
CRR073309Second white 14.741
CRR073310Second white 23.254
CRR073311Second white 32.748
CRR073312Silver flowering 12.633
CRR073313Silver flowering 24.299
CRR073314Silver flowering 32.458
CRR073315Gold flowering 135.287
CRR073316Gold flowering 246.283
CRR073317Gold flowering 345.479
CRR073318Tawny withering 114.318
CRR073319Tawny withering 26.926
CRR073320Tawny withering 310.610