Detail information of GWHGAAZE014130


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP41691.16.8659E-169hypothetical protein JCGZ_16098 [Jatropha curcas]
Swissprottr|P0C7P8|LHWL1_ARATH2E-18Transcription factor EMB1444
trEMBLtr|A0A067KZR7|A0A067KZR7_JATCU3E-169Uncharacterized protein {ECO:0000313|EMBL:KDP41691.1}
TAIR10AT1G60060.16E-69Serine/threonine-protein kinase WNK (With No Lysine)-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene63767626378368-
GWHAAZE00000004mRNA63767626378368-
GWHAAZE00000004exon63767626377268-
GWHAAZE00000004exon63773486377404-
GWHAAZE00000004exon63774936377534-
GWHAAZE00000004exon63776326377740-
GWHAAZE00000004exon63778336377964-
GWHAAZE00000004exon63780536378112-
GWHAAZE00000004exon63782266378368-
GWHAAZE00000004CDS63782266378368-
GWHAAZE00000004CDS63780536378112-
GWHAAZE00000004CDS63778336377964-
GWHAAZE00000004CDS63776326377740-
GWHAAZE00000004CDS63774936377534-
GWHAAZE00000004CDS63773486377404-
GWHAAZE00000004CDS63767626377268-
Transcript Sequence

Network for GWHGAAZE014130

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0091
CFinderModule0209


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14215.7bHLH-MYC_N121961.10E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.493
SRR3591706second leaf53.209
SRR3591707mature leaf6.181
SRR3591708Shoot apex38.807
SRR3591709Stem10.961
SRR3591710White floral bud1.742
SRR3591711White flower2.577
SRR3591712Green floral bud3.444
SRR3591713Yellow flower0.817
SRP173429 SRR8316895Juvenile bud stage 16.076
SRR8316896Juvenile bud stage 19.743
SRR8316897Juvenile bud stage 6.936
SRR8316894Third green stage 6.073
SRR8316900Third green stage 9.186
SRR8316901Third green stage 4.204
SRR8316898Complete white stage 0.149
SRR8316899Complete white stage 4.939
SRR8316903Complete white stage 0.586
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.079
SRR8316905Silver flowering stage0.037
SRR8316906Gold flowering stage 0.267
SRR8316907Gold flowering stage 0.067
SRR8316908Gold flowering stage 0.438
SRP132670SRR6706286Control4.145
SRR6706287Light intensity 50%4.931
SRR6706288Light intensity 20%4.529
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.006
CNS0095593Slightly white alabastrum(diploid) 214.647
CNS0095594Slightly white alabastrum(diploid) 310.027
CNS0095595Whole white alabastrum(diploid) 27.025
CNS0095596Whole white alabastrum(diploid) 32.552
CNS0095597Whole white alabastrum(diploid) 43.888
CNS0095598Silvery flower (diploied) 11.389
CNS0095599Silvery flower (diploied) 22.063
CNS0095600Silvery flower (diploied) 30.576
CNS0095601Golden flower (diploid) 11.833
CNS0095602Golden flower (diploid) 21.098
CNS0095603Golden flower (diploid) 31.163
CNS0095604Slightly white alabastrum(tetraploid) 121.306
CNS0095605Slightly white alabastrum(tetraploid) 217.555
CNS0095606Slightly white alabastrum(tetraploid) 340.504
CNS0095607Whole white alabastrum(tetraploid) 15.596
CNS0095608Whole white alabastrum(tetraploid) 22.900
CNS0095609Whole white alabastrum(tetraploid) 311.056
CNS0095610Silvery flower (tetraploid) 10.202
CNS0095611Silvery flower (tetraploid) 20.729
CNS0095612Silvery flower (tetraploid) 30.431
CNS0095613Golden flower (tetraploid) 10.431
CNS0095614Golden flower (tetraploid) 20.154
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 112.395
CRR073298Stem 214.586
CRR073299Stem 313.492
CRR073300Leaf 16.255
CRR073301Leaf 27.933
CRR073302Leaf 36.731
CRR073303Juvenile bud 13.096
CRR073304Juvenile bud 20.604
CRR073305Juvenile bud 32.040
CRR073306Third green 10.039
CRR073307Third green 20.000
CRR073308Third green 30.517
CRR073309Second white 10.113
CRR073310Second white 20.207
CRR073311Second white 30.000
CRR073312Silver flowering 10.058
CRR073313Silver flowering 20.167
CRR073314Silver flowering 30.040
CRR073315Gold flowering 12.158
CRR073316Gold flowering 22.821
CRR073317Gold flowering 33.589
CRR073318Tawny withering 14.063
CRR073319Tawny withering 21.858
CRR073320Tawny withering 33.611