Detail information of GWHGAAZE014139


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAHB17750.11.11104E-76GA signaling F-Box [Actinidia deliciosa]
Swissprottr|Q9STX3|GID2_ARATH7E-60F-box protein GID2
trEMBLtr|V5QN53|V5QN53_ACTDE4E-77GA signaling F-Box {ECO:0000313|EMBL:AHB17750.1}
TAIR10AT4G24210.16E-39F-box family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene65749686575516-
GWHAAZE00000004mRNA65749686575516-
GWHAAZE00000004exon65749686575516-
GWHAAZE00000004CDS65749686575516-
Transcript Sequence

Network for GWHGAAZE014139

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box42811.30E-07
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
K14495GID2, SLY1 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf136.971
SRR3591706second leaf112.240
SRR3591707mature leaf98.076
SRR3591708Shoot apex178.098
SRR3591709Stem138.197
SRR3591710White floral bud134.716
SRR3591711White flower126.978
SRR3591712Green floral bud101.695
SRR3591713Yellow flower63.008
SRP173429 SRR8316895Juvenile bud stage 79.184
SRR8316896Juvenile bud stage 83.059
SRR8316897Juvenile bud stage 45.570
SRR8316894Third green stage 25.956
SRR8316900Third green stage 81.811
SRR8316901Third green stage 96.037
SRR8316898Complete white stage 43.014
SRR8316899Complete white stage 155.941
SRR8316903Complete white stage 63.602
SRR8316902Silver flowering stage47.182
SRR8316904Silver flowering stage40.893
SRR8316905Silver flowering stage26.282
SRR8316906Gold flowering stage 65.205
SRR8316907Gold flowering stage 83.476
SRR8316908Gold flowering stage 85.825
SRP132670SRR6706286Control82.620
SRR6706287Light intensity 50%84.335
SRR6706288Light intensity 20%91.006
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1126.482
CNS0095593Slightly white alabastrum(diploid) 2126.461
CNS0095594Slightly white alabastrum(diploid) 3114.477
CNS0095595Whole white alabastrum(diploid) 293.535
CNS0095596Whole white alabastrum(diploid) 385.449
CNS0095597Whole white alabastrum(diploid) 483.242
CNS0095598Silvery flower (diploied) 1157.998
CNS0095599Silvery flower (diploied) 2101.778
CNS0095600Silvery flower (diploied) 3120.888
CNS0095601Golden flower (diploid) 1148.607
CNS0095602Golden flower (diploid) 2136.617
CNS0095603Golden flower (diploid) 3132.161
CNS0095604Slightly white alabastrum(tetraploid) 176.026
CNS0095605Slightly white alabastrum(tetraploid) 278.659
CNS0095606Slightly white alabastrum(tetraploid) 3114.653
CNS0095607Whole white alabastrum(tetraploid) 157.463
CNS0095608Whole white alabastrum(tetraploid) 251.342
CNS0095609Whole white alabastrum(tetraploid) 361.837
CNS0095610Silvery flower (tetraploid) 167.789
CNS0095611Silvery flower (tetraploid) 294.173
CNS0095612Silvery flower (tetraploid) 3111.088
CNS0095613Golden flower (tetraploid) 156.598
CNS0095614Golden flower (tetraploid) 265.674
CNS0095615Golden flower (tetraploid) 370.127
CRA001975CRR073297Stem 1116.818
CRR073298Stem 2131.049
CRR073299Stem 3191.484
CRR073300Leaf 1123.192
CRR073301Leaf 2144.049
CRR073302Leaf 3164.672
CRR073303Juvenile bud 1141.003
CRR073304Juvenile bud 2128.639
CRR073305Juvenile bud 3175.955
CRR073306Third green 1221.753
CRR073307Third green 2269.124
CRR073308Third green 3196.575
CRR073309Second white 1182.205
CRR073310Second white 2143.963
CRR073311Second white 3101.069
CRR073312Silver flowering 187.218
CRR073313Silver flowering 285.742
CRR073314Silver flowering 373.491
CRR073315Gold flowering 1140.230
CRR073316Gold flowering 2121.674
CRR073317Gold flowering 3188.504
CRR073318Tawny withering 1119.980
CRR073319Tawny withering 297.643
CRR073320Tawny withering 385.024