Detail information of GWHGAAZE014163


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006362057.14.82435E-32PREDICTED: adenine phosphoribosyltransferase 1, chloroplastic-like [Solanum tuberosum]
Swissprottr|P31166|APT1_ARATH4E-28Adenine phosphoribosyltransferase 1, chloroplastic (Precursor)
trEMBLtr|K4BUN4|K4BUN4_SOLLC5E-30Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc04g077970.2.1}
TAIR10AT1G27450.13E-19adenine phosphoribosyl transferase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene69886096989202+
GWHAAZE00000004mRNA69886096989202+
GWHAAZE00000004exon69886096988918+
GWHAAZE00000004exon69890276989202+
GWHAAZE00000004CDS69886096988918+
GWHAAZE00000004CDS69890276989202+
Transcript Sequence

Network for GWHGAAZE014163

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00759APRT, apt Metabolic pathways map01100
Purine metabolismmap00230

Gene Ontology

GO term OntologyName

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE014163.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 3020406080100120140160180200220Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf137.352
SRR3591706second leaf71.587
SRR3591707mature leaf74.727
SRR3591708Shoot apex118.356
SRR3591709Stem102.241
SRR3591710White floral bud150.395
SRR3591711White flower201.440
SRR3591712Green floral bud147.649
SRR3591713Yellow flower197.792
SRP173429 SRR8316895Juvenile bud stage 47.705
SRR8316896Juvenile bud stage 57.435
SRR8316897Juvenile bud stage 35.846
SRR8316894Third green stage 33.555
SRR8316900Third green stage 98.923
SRR8316901Third green stage 88.995
SRR8316898Complete white stage 62.832
SRR8316899Complete white stage 142.889
SRR8316903Complete white stage 91.351
SRR8316902Silver flowering stage82.405
SRR8316904Silver flowering stage88.503
SRR8316905Silver flowering stage55.910
SRR8316906Gold flowering stage 156.030
SRR8316907Gold flowering stage 147.239
SRR8316908Gold flowering stage 156.302
SRP132670SRR6706286Control159.323
SRR6706287Light intensity 50%154.493
SRR6706288Light intensity 20%168.061
CNP0000432CNS0095592Slightly white alabastrum(diploid) 152.158
CNS0095593Slightly white alabastrum(diploid) 250.028
CNS0095594Slightly white alabastrum(diploid) 342.782
CNS0095595Whole white alabastrum(diploid) 248.549
CNS0095596Whole white alabastrum(diploid) 347.290
CNS0095597Whole white alabastrum(diploid) 441.837
CNS0095598Silvery flower (diploied) 183.740
CNS0095599Silvery flower (diploied) 276.623
CNS0095600Silvery flower (diploied) 3140.827
CNS0095601Golden flower (diploid) 170.930
CNS0095602Golden flower (diploid) 2135.301
CNS0095603Golden flower (diploid) 3124.944
CNS0095604Slightly white alabastrum(tetraploid) 157.026
CNS0095605Slightly white alabastrum(tetraploid) 247.006
CNS0095606Slightly white alabastrum(tetraploid) 3111.200
CNS0095607Whole white alabastrum(tetraploid) 140.871
CNS0095608Whole white alabastrum(tetraploid) 231.399
CNS0095609Whole white alabastrum(tetraploid) 380.239
CNS0095610Silvery flower (tetraploid) 1126.143
CNS0095611Silvery flower (tetraploid) 2131.724
CNS0095612Silvery flower (tetraploid) 3122.173
CNS0095613Golden flower (tetraploid) 181.356
CNS0095614Golden flower (tetraploid) 2126.809
CNS0095615Golden flower (tetraploid) 395.196
CRA001975CRR073297Stem 181.095
CRR073298Stem 284.880
CRR073299Stem 382.027
CRR073300Leaf 191.832
CRR073301Leaf 292.265
CRR073302Leaf 3120.792
CRR073303Juvenile bud 1125.638
CRR073304Juvenile bud 2121.286
CRR073305Juvenile bud 3107.508
CRR073306Third green 196.113
CRR073307Third green 2116.448
CRR073308Third green 396.380
CRR073309Second white 1107.610
CRR073310Second white 263.809
CRR073311Second white 359.498
CRR073312Silver flowering 155.935
CRR073313Silver flowering 274.164
CRR073314Silver flowering 354.796
CRR073315Gold flowering 168.207
CRR073316Gold flowering 282.051
CRR073317Gold flowering 378.642
CRR073318Tawny withering 199.646
CRR073319Tawny withering 2111.185
CRR073320Tawny withering 391.930