Detail information of GWHGAAZE014197


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004292776.10PREDICTED: sodium-coupled neutral amino acid transporter 3-like [Fragaria vesca subsp. vesca]
trEMBLtr|M1A1L7|M1A1L7_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400012671}
TAIR10AT3G30390.24E-143Transmembrane amino acid transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene76210747626690-
GWHAAZE00000004mRNA76210747626690-
GWHAAZE00000004exon76210747621212-
GWHAAZE00000004exon76217537622218-
GWHAAZE00000004exon76223387622475-
GWHAAZE00000004exon76229307622971-
GWHAAZE00000004exon76256797625831-
GWHAAZE00000004exon76263037626690-
GWHAAZE00000004CDS76263037626690-
GWHAAZE00000004CDS76256797625831-
GWHAAZE00000004CDS76229307622971-
GWHAAZE00000004CDS76223387622475-
GWHAAZE00000004CDS76217537622218-
GWHAAZE00000004CDS76210747621212-
Transcript Sequence

Network for GWHGAAZE014197

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans314221.20E-54
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K14207SLC38A2, SNAT2 Protein digestion and absorption map04974
Glutamatergic synapsemap04724
GABAergic synapsemap04727

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.543
SRR3591706second leaf2.941
SRR3591707mature leaf4.490
SRR3591708Shoot apex6.804
SRR3591709Stem12.714
SRR3591710White floral bud14.425
SRR3591711White flower19.616
SRR3591712Green floral bud15.966
SRR3591713Yellow flower15.924
SRP173429 SRR8316895Juvenile bud stage 5.282
SRR8316896Juvenile bud stage 6.630
SRR8316897Juvenile bud stage 2.438
SRR8316894Third green stage 3.480
SRR8316900Third green stage 12.195
SRR8316901Third green stage 10.544
SRR8316898Complete white stage 6.782
SRR8316899Complete white stage 9.242
SRR8316903Complete white stage 10.030
SRR8316902Silver flowering stage9.407
SRR8316904Silver flowering stage14.330
SRR8316905Silver flowering stage6.936
SRR8316906Gold flowering stage 23.475
SRR8316907Gold flowering stage 24.267
SRR8316908Gold flowering stage 21.901
SRP132670SRR6706286Control6.632
SRR6706287Light intensity 50%7.621
SRR6706288Light intensity 20%7.016
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.370
CNS0095593Slightly white alabastrum(diploid) 24.624
CNS0095594Slightly white alabastrum(diploid) 34.089
CNS0095595Whole white alabastrum(diploid) 27.462
CNS0095596Whole white alabastrum(diploid) 38.679
CNS0095597Whole white alabastrum(diploid) 49.293
CNS0095598Silvery flower (diploied) 15.825
CNS0095599Silvery flower (diploied) 27.385
CNS0095600Silvery flower (diploied) 325.222
CNS0095601Golden flower (diploid) 17.293
CNS0095602Golden flower (diploid) 219.534
CNS0095603Golden flower (diploid) 321.434
CNS0095604Slightly white alabastrum(tetraploid) 17.526
CNS0095605Slightly white alabastrum(tetraploid) 27.894
CNS0095606Slightly white alabastrum(tetraploid) 38.642
CNS0095607Whole white alabastrum(tetraploid) 113.303
CNS0095608Whole white alabastrum(tetraploid) 215.182
CNS0095609Whole white alabastrum(tetraploid) 310.729
CNS0095610Silvery flower (tetraploid) 116.280
CNS0095611Silvery flower (tetraploid) 219.550
CNS0095612Silvery flower (tetraploid) 330.656
CNS0095613Golden flower (tetraploid) 111.355
CNS0095614Golden flower (tetraploid) 213.933
CNS0095615Golden flower (tetraploid) 326.491
CRA001975CRR073297Stem 16.885
CRR073298Stem 26.114
CRR073299Stem 36.862
CRR073300Leaf 18.054
CRR073301Leaf 26.411
CRR073302Leaf 35.755
CRR073303Juvenile bud 17.682
CRR073304Juvenile bud 28.022
CRR073305Juvenile bud 33.061
CRR073306Third green 121.758
CRR073307Third green 214.008
CRR073308Third green 316.944
CRR073309Second white 130.380
CRR073310Second white 228.644
CRR073311Second white 329.143
CRR073312Silver flowering 128.751
CRR073313Silver flowering 230.229
CRR073314Silver flowering 332.464
CRR073315Gold flowering 12.733
CRR073316Gold flowering 21.692
CRR073317Gold flowering 33.176
CRR073318Tawny withering 15.194
CRR073319Tawny withering 23.991
CRR073320Tawny withering 35.822