Detail information of GWHGAAZE014304


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010664345.10PREDICTED: F-box protein At1g78280 isoform X1 [Vitis vinifera]
Swissprottr|Q9M9E8|FB92_ARATH0F-box protein At1g78280
trEMBLtr|E0CRN6|E0CRN6_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI19190.3}
TAIR10AT1G78280.10transferases, transferring glycosyl groups

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene97757669784860-
GWHAAZE00000004mRNA97757669784860-
GWHAAZE00000004exon97757669775907-
GWHAAZE00000004exon97769519777119-
GWHAAZE00000004exon97777599777912-
GWHAAZE00000004exon97780579778135-
GWHAAZE00000004exon97783129778575-
GWHAAZE00000004exon97786619778992-
GWHAAZE00000004exon97790839779163-
GWHAAZE00000004exon97795679779689-
GWHAAZE00000004exon97806709781245-
GWHAAZE00000004exon97813579781456-
GWHAAZE00000004exon97819679782166-
GWHAAZE00000004exon97822679782464-
GWHAAZE00000004exon97828459782987-
GWHAAZE00000004exon97830769783131-
GWHAAZE00000004exon97832269783336-
GWHAAZE00000004exon97847069784860-
GWHAAZE00000004CDS97847069784860-
GWHAAZE00000004CDS97832269783336-
GWHAAZE00000004CDS97830769783131-
GWHAAZE00000004CDS97828459782987-
GWHAAZE00000004CDS97822679782464-
GWHAAZE00000004CDS97819679782166-
GWHAAZE00000004CDS97813579781456-
GWHAAZE00000004CDS97806709781245-
GWHAAZE00000004CDS97795679779689-
GWHAAZE00000004CDS97790839779163-
GWHAAZE00000004CDS97786619778992-
GWHAAZE00000004CDS97783129778575-
GWHAAZE00000004CDS97780579778135-
GWHAAZE00000004CDS97777599777912-
GWHAAZE00000004CDS97769519777119-
GWHAAZE00000004CDS97757669775907-
Transcript Sequence

Network for GWHGAAZE014304

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12937.8F-box-like27691.40E-07
PF13621.7Cupin_81443733.70E-22
PF01636.24APH6758879.50E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyJumonji
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf56.266
SRR3591706second leaf8.161
SRR3591707mature leaf9.436
SRR3591708Shoot apex12.495
SRR3591709Stem26.803
SRR3591710White floral bud18.267
SRR3591711White flower23.156
SRR3591712Green floral bud17.340
SRR3591713Yellow flower17.367
SRP173429 SRR8316895Juvenile bud stage 38.813
SRR8316896Juvenile bud stage 52.799
SRR8316897Juvenile bud stage 49.007
SRR8316894Third green stage 5.808
SRR8316900Third green stage 14.635
SRR8316901Third green stage 19.349
SRR8316898Complete white stage 6.601
SRR8316899Complete white stage 31.418
SRR8316903Complete white stage 10.941
SRR8316902Silver flowering stage13.108
SRR8316904Silver flowering stage14.725
SRR8316905Silver flowering stage4.471
SRR8316906Gold flowering stage 16.288
SRR8316907Gold flowering stage 12.594
SRR8316908Gold flowering stage 18.409
SRP132670SRR6706286Control6.227
SRR6706287Light intensity 50%6.394
SRR6706288Light intensity 20%6.556
CNP0000432CNS0095592Slightly white alabastrum(diploid) 126.947
CNS0095593Slightly white alabastrum(diploid) 237.983
CNS0095594Slightly white alabastrum(diploid) 334.599
CNS0095595Whole white alabastrum(diploid) 234.398
CNS0095596Whole white alabastrum(diploid) 311.220
CNS0095597Whole white alabastrum(diploid) 419.275
CNS0095598Silvery flower (diploied) 119.755
CNS0095599Silvery flower (diploied) 241.001
CNS0095600Silvery flower (diploied) 334.088
CNS0095601Golden flower (diploid) 138.480
CNS0095602Golden flower (diploid) 248.636
CNS0095603Golden flower (diploid) 347.810
CNS0095604Slightly white alabastrum(tetraploid) 19.377
CNS0095605Slightly white alabastrum(tetraploid) 28.521
CNS0095606Slightly white alabastrum(tetraploid) 312.382
CNS0095607Whole white alabastrum(tetraploid) 19.099
CNS0095608Whole white alabastrum(tetraploid) 210.480
CNS0095609Whole white alabastrum(tetraploid) 311.922
CNS0095610Silvery flower (tetraploid) 112.693
CNS0095611Silvery flower (tetraploid) 212.459
CNS0095612Silvery flower (tetraploid) 322.298
CNS0095613Golden flower (tetraploid) 16.532
CNS0095614Golden flower (tetraploid) 29.598
CNS0095615Golden flower (tetraploid) 315.493
CRA001975CRR073297Stem 114.163
CRR073298Stem 210.181
CRR073299Stem 39.834
CRR073300Leaf 115.001
CRR073301Leaf 213.074
CRR073302Leaf 311.793
CRR073303Juvenile bud 17.127
CRR073304Juvenile bud 28.292
CRR073305Juvenile bud 38.660
CRR073306Third green 112.825
CRR073307Third green 212.354
CRR073308Third green 313.318
CRR073309Second white 18.925
CRR073310Second white 214.354
CRR073311Second white 312.617
CRR073312Silver flowering 113.468
CRR073313Silver flowering 211.654
CRR073314Silver flowering 312.664
CRR073315Gold flowering 17.498
CRR073316Gold flowering 222.046
CRR073317Gold flowering 34.878
CRR073318Tawny withering 124.972
CRR073319Tawny withering 233.526
CRR073320Tawny withering 323.510