Detail information of GWHGAAZE014305


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009372963.10PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like [Pyrus x bretschneideri]
Swissprottr|P21357|AROF_SOLTU0Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic (Precursor)
trEMBLtr|M1D1C6|M1D1C6_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400079161}
TAIR10AT1G22410.10Class-II DAHP synthetase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene98013399804958-
GWHAAZE00000004mRNA98013399804958-
GWHAAZE00000004exon98044079804958-
GWHAAZE00000004exon98039129804096-
GWHAAZE00000004exon98030069803282-
GWHAAZE00000004exon98026419802886-
GWHAAZE00000004exon98013399801593-
GWHAAZE00000004CDS98044079804958-
GWHAAZE00000004CDS98039129804096-
GWHAAZE00000004CDS98030069803282-
GWHAAZE00000004CDS98026419802886-
GWHAAZE00000004CDS98013399801593-
Transcript Sequence

Network for GWHGAAZE014305

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01474.17DAHP_synth_22474891.40E-109
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01626E2.5.1.54, aroF, aroG, aroH Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Quorum sensingmap02024

Gene Ontology

GO term OntologyName
GO:0009073biological_processaromatic amino acid family biosynthetic process
GO:0003824molecular_functioncatalytic activity
GO:0003849molecular_function3-deoxy-7-phosphoheptulonate synthase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf160.437
SRR3591706second leaf477.076
SRR3591707mature leaf233.902
SRR3591708Shoot apex174.223
SRR3591709Stem193.018
SRR3591710White floral bud146.517
SRR3591711White flower192.517
SRR3591712Green floral bud240.094
SRR3591713Yellow flower96.391
SRP173429 SRR8316895Juvenile bud stage 88.139
SRR8316896Juvenile bud stage 112.410
SRR8316897Juvenile bud stage 49.445
SRR8316894Third green stage 50.151
SRR8316900Third green stage 157.168
SRR8316901Third green stage 169.833
SRR8316898Complete white stage 22.846
SRR8316899Complete white stage 125.141
SRR8316903Complete white stage 28.632
SRR8316902Silver flowering stage65.684
SRR8316904Silver flowering stage91.940
SRR8316905Silver flowering stage68.374
SRR8316906Gold flowering stage 162.408
SRR8316907Gold flowering stage 146.389
SRR8316908Gold flowering stage 236.059
SRP132670SRR6706286Control97.169
SRR6706287Light intensity 50%111.742
SRR6706288Light intensity 20%117.629
CNP0000432CNS0095592Slightly white alabastrum(diploid) 186.126
CNS0095593Slightly white alabastrum(diploid) 2118.064
CNS0095594Slightly white alabastrum(diploid) 366.611
CNS0095595Whole white alabastrum(diploid) 284.941
CNS0095596Whole white alabastrum(diploid) 371.858
CNS0095597Whole white alabastrum(diploid) 469.409
CNS0095598Silvery flower (diploied) 125.293
CNS0095599Silvery flower (diploied) 236.123
CNS0095600Silvery flower (diploied) 315.897
CNS0095601Golden flower (diploid) 118.489
CNS0095602Golden flower (diploid) 214.784
CNS0095603Golden flower (diploid) 313.110
CNS0095604Slightly white alabastrum(tetraploid) 168.625
CNS0095605Slightly white alabastrum(tetraploid) 253.748
CNS0095606Slightly white alabastrum(tetraploid) 3162.349
CNS0095607Whole white alabastrum(tetraploid) 142.261
CNS0095608Whole white alabastrum(tetraploid) 230.948
CNS0095609Whole white alabastrum(tetraploid) 359.889
CNS0095610Silvery flower (tetraploid) 122.451
CNS0095611Silvery flower (tetraploid) 215.868
CNS0095612Silvery flower (tetraploid) 373.946
CNS0095613Golden flower (tetraploid) 120.777
CNS0095614Golden flower (tetraploid) 236.793
CNS0095615Golden flower (tetraploid) 318.762
CRA001975CRR073297Stem 1313.765
CRR073298Stem 2338.838
CRR073299Stem 3408.913
CRR073300Leaf 1410.462
CRR073301Leaf 2365.744
CRR073302Leaf 3421.934
CRR073303Juvenile bud 1269.324
CRR073304Juvenile bud 2255.702
CRR073305Juvenile bud 3345.457
CRR073306Third green 1278.851
CRR073307Third green 2131.624
CRR073308Third green 3180.195
CRR073309Second white 191.555
CRR073310Second white 263.648
CRR073311Second white 359.010
CRR073312Silver flowering 1137.053
CRR073313Silver flowering 2203.673
CRR073314Silver flowering 3223.411
CRR073315Gold flowering 1175.500
CRR073316Gold flowering 2236.933
CRR073317Gold flowering 3211.729
CRR073318Tawny withering 1126.175
CRR073319Tawny withering 2137.840
CRR073320Tawny withering 385.937