Detail information of GWHGAAZE014361


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010245871.10PREDICTED: angio-associated migratory cell protein [Nelumbo nucifera]
Swissprottr|Q3Y8L7|DAW1_CHLRE2E-36Dynein assembly factor with WDR repeat domains 1
trEMBLtr|A0A0A0KBX7|A0A0A0KBX7_CUCSA0Uncharacterized protein {ECO:0000313|EMBL:KGN45882.1}
TAIR10AT1G71840.16E-143transducin family protein / WD-40 repeat family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1095776710962919-
GWHAAZE00000004mRNA1095776710962919-
GWHAAZE00000004exon1096282910962919-
GWHAAZE00000004exon1096266610962716-
GWHAAZE00000004exon1096240410962445-
GWHAAZE00000004exon1096140110961520-
GWHAAZE00000004exon1096108310961228-
GWHAAZE00000004exon1096085610961003-
GWHAAZE00000004exon1096063010960713-
GWHAAZE00000004exon1095977210959887-
GWHAAZE00000004exon1095940910959467-
GWHAAZE00000004exon1095859110958681-
GWHAAZE00000004exon1095776710958213-
GWHAAZE00000004CDS1096282910962919-
GWHAAZE00000004CDS1096266610962716-
GWHAAZE00000004CDS1096240410962445-
GWHAAZE00000004CDS1096140110961520-
GWHAAZE00000004CDS1096108310961228-
GWHAAZE00000004CDS1096085610961003-
GWHAAZE00000004CDS1096063010960713-
GWHAAZE00000004CDS1095977210959887-
GWHAAZE00000004CDS1095940910959467-
GWHAAZE00000004CDS1095859110958681-
GWHAAZE00000004CDS1095798610958213-
GWHAAZE00000004three_prime_UTR1095776710957985-
Transcript Sequence

Network for GWHGAAZE014361

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD4053850.27
PF00400.33WD40991321.40E-07
PF00400.33WD401391740.0016
PF00400.33WD401822166.80E-08
PF00400.33WD402222590.0041
PF00400.33WD402663033.50E-06
PF00400.33WD403143445.10E-05
PF00400.33WD403483859.20E-07
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.458
SRR3591706second leaf14.361
SRR3591707mature leaf22.334
SRR3591708Shoot apex35.149
SRR3591709Stem40.343
SRR3591710White floral bud35.428
SRR3591711White flower64.784
SRR3591712Green floral bud44.770
SRR3591713Yellow flower48.860
SRP173429 SRR8316895Juvenile bud stage 27.274
SRR8316896Juvenile bud stage 42.064
SRR8316897Juvenile bud stage 24.367
SRR8316894Third green stage 15.907
SRR8316900Third green stage 51.676
SRR8316901Third green stage 47.589
SRR8316898Complete white stage 24.624
SRR8316899Complete white stage 66.161
SRR8316903Complete white stage 32.490
SRR8316902Silver flowering stage48.268
SRR8316904Silver flowering stage65.857
SRR8316905Silver flowering stage30.032
SRR8316906Gold flowering stage 102.856
SRR8316907Gold flowering stage 99.441
SRR8316908Gold flowering stage 119.516
SRP132670SRR6706286Control72.271
SRR6706287Light intensity 50%69.743
SRR6706288Light intensity 20%71.558
CNP0000432CNS0095592Slightly white alabastrum(diploid) 152.532
CNS0095593Slightly white alabastrum(diploid) 253.462
CNS0095594Slightly white alabastrum(diploid) 348.951
CNS0095595Whole white alabastrum(diploid) 241.882
CNS0095596Whole white alabastrum(diploid) 341.417
CNS0095597Whole white alabastrum(diploid) 436.548
CNS0095598Silvery flower (diploied) 156.445
CNS0095599Silvery flower (diploied) 257.939
CNS0095600Silvery flower (diploied) 384.762
CNS0095601Golden flower (diploid) 146.999
CNS0095602Golden flower (diploid) 250.204
CNS0095603Golden flower (diploid) 352.413
CNS0095604Slightly white alabastrum(tetraploid) 144.765
CNS0095605Slightly white alabastrum(tetraploid) 244.065
CNS0095606Slightly white alabastrum(tetraploid) 361.689
CNS0095607Whole white alabastrum(tetraploid) 127.376
CNS0095608Whole white alabastrum(tetraploid) 228.136
CNS0095609Whole white alabastrum(tetraploid) 354.377
CNS0095610Silvery flower (tetraploid) 198.841
CNS0095611Silvery flower (tetraploid) 286.232
CNS0095612Silvery flower (tetraploid) 3269.939
CNS0095613Golden flower (tetraploid) 158.953
CNS0095614Golden flower (tetraploid) 263.188
CNS0095615Golden flower (tetraploid) 343.717
CRA001975CRR073297Stem 157.757
CRR073298Stem 258.177
CRR073299Stem 358.288
CRR073300Leaf 164.129
CRR073301Leaf 268.014
CRR073302Leaf 382.709
CRR073303Juvenile bud 174.640
CRR073304Juvenile bud 267.040
CRR073305Juvenile bud 362.826
CRR073306Third green 1243.356
CRR073307Third green 2185.738
CRR073308Third green 3211.362
CRR073309Second white 1212.619
CRR073310Second white 2261.402
CRR073311Second white 3219.950
CRR073312Silver flowering 1156.101
CRR073313Silver flowering 2119.153
CRR073314Silver flowering 3103.906
CRR073315Gold flowering 165.570
CRR073316Gold flowering 282.462
CRR073317Gold flowering 341.495
CRR073318Tawny withering 162.773
CRR073319Tawny withering 264.657
CRR073320Tawny withering 361.661