Detail information of GWHGAAZE014372


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011035779.14.3144E-140PREDICTED: putative lipoate-protein ligase A isoform X1 [Populus euphratica]
trEMBLtr|B9T0T0|B9T0T0_RICCO8E-140Lipoate-protein ligase, putative {ECO:0000313|EMBL:EEF30527.1}
TAIR10AT3G29010.15E-94Biotin/lipoate A/B protein ligase family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1110726711109319-
GWHAAZE00000004mRNA1110726711109319-
GWHAAZE00000004exon1110726711107488-
GWHAAZE00000004exon1110835511108542-
GWHAAZE00000004exon1110873611108974-
GWHAAZE00000004exon1110914111109319-
GWHAAZE00000004CDS1110914111109319-
GWHAAZE00000004CDS1110873611108974-
GWHAAZE00000004CDS1110835511108542-
GWHAAZE00000004CDS1110726711107488-
Transcript Sequence

Network for GWHGAAZE014372

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0178


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006464biological_processcellular protein modification process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.785
SRR3591706second leaf15.984
SRR3591707mature leaf14.405
SRR3591708Shoot apex20.964
SRR3591709Stem27.040
SRR3591710White floral bud18.952
SRR3591711White flower27.035
SRR3591712Green floral bud36.687
SRR3591713Yellow flower19.562
SRP173429 SRR8316895Juvenile bud stage 18.523
SRR8316896Juvenile bud stage 23.014
SRR8316897Juvenile bud stage 10.184
SRR8316894Third green stage 11.527
SRR8316900Third green stage 38.604
SRR8316901Third green stage 37.805
SRR8316898Complete white stage 10.212
SRR8316899Complete white stage 65.354
SRR8316903Complete white stage 14.970
SRR8316902Silver flowering stage8.682
SRR8316904Silver flowering stage9.386
SRR8316905Silver flowering stage5.593
SRR8316906Gold flowering stage 23.456
SRR8316907Gold flowering stage 20.787
SRR8316908Gold flowering stage 14.425
SRP132670SRR6706286Control15.569
SRR6706287Light intensity 50%18.925
SRR6706288Light intensity 20%21.070
CNP0000432CNS0095592Slightly white alabastrum(diploid) 126.409
CNS0095593Slightly white alabastrum(diploid) 238.649
CNS0095594Slightly white alabastrum(diploid) 324.563
CNS0095595Whole white alabastrum(diploid) 231.574
CNS0095596Whole white alabastrum(diploid) 332.675
CNS0095597Whole white alabastrum(diploid) 429.857
CNS0095598Silvery flower (diploied) 119.828
CNS0095599Silvery flower (diploied) 220.370
CNS0095600Silvery flower (diploied) 312.262
CNS0095601Golden flower (diploid) 115.313
CNS0095602Golden flower (diploid) 211.093
CNS0095603Golden flower (diploid) 310.876
CNS0095604Slightly white alabastrum(tetraploid) 132.599
CNS0095605Slightly white alabastrum(tetraploid) 229.769
CNS0095606Slightly white alabastrum(tetraploid) 333.921
CNS0095607Whole white alabastrum(tetraploid) 122.626
CNS0095608Whole white alabastrum(tetraploid) 221.359
CNS0095609Whole white alabastrum(tetraploid) 331.040
CNS0095610Silvery flower (tetraploid) 115.306
CNS0095611Silvery flower (tetraploid) 210.731
CNS0095612Silvery flower (tetraploid) 319.917
CNS0095613Golden flower (tetraploid) 110.388
CNS0095614Golden flower (tetraploid) 213.984
CNS0095615Golden flower (tetraploid) 311.114
CRA001975CRR073297Stem 112.377
CRR073298Stem 213.456
CRR073299Stem 37.354
CRR073300Leaf 116.665
CRR073301Leaf 213.390
CRR073302Leaf 311.168
CRR073303Juvenile bud 111.245
CRR073304Juvenile bud 27.048
CRR073305Juvenile bud 313.586
CRR073306Third green 11.189
CRR073307Third green 21.801
CRR073308Third green 32.013
CRR073309Second white 13.538
CRR073310Second white 24.502
CRR073311Second white 35.202
CRR073312Silver flowering 13.118
CRR073313Silver flowering 22.079
CRR073314Silver flowering 33.612
CRR073315Gold flowering 13.488
CRR073316Gold flowering 26.949
CRR073317Gold flowering 32.214
CRR073318Tawny withering 17.168
CRR073319Tawny withering 27.181
CRR073320Tawny withering 37.635