Gene detail

Detail information of GWHGAAZE014435

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009596950.1	0	PREDICTED: exocyst complex component EXO70B1-like isoform X2 [Nicotiana tomentosiformis]
Swissprot	tr\|Q9FGH9\|E70B1_ARATH	2E-109	Exocyst complex component EXO70B1
trEMBL	tr\|A0A068U1D4\|A0A068U1D4_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_8 {ECO:0000313\|EMBL:CDP02316.1}
TAIR10	AT3G29400.1	3E-179	exocyst subunit exo70 family protein E1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	11877972	11879906	-
GWHAAZE00000004	mRNA	11877972	11879906	-
GWHAAZE00000004	exon	11878585	11879906	-
GWHAAZE00000004	exon	11877972	11878554	-
GWHAAZE00000004	CDS	11878585	11879906	-
GWHAAZE00000004	CDS	11877972	11878554	-

Transcript Sequence
>GWHTAAZE014449 ATGGAAGGGGAAGAGAACTTGATTGCTGCAGCCCAGCACATTGTGAAGGCATTAGAGACAAACAAGAACTTAACAAATGATGCAAGGAAAATCTTGGCTGATCTAGGCTCCCAATTGTCCTCCATGGCCATAATCACTGAGAACAAAGATGCGGTGTTGAGCAGTGAGATCGAGCGTCGGCTTAATTTGGTTCACGATAAGGTCATGAATTGGGAGATAGATCAATCCATGATATGGGACTCTGGCCCTGAAGAAGCTAATGAGTATTTAAAGGCCATTGATGAGGCTCAAAAATTAATCGAGAGCTTAGAGGGCTTGAATCTCAATAAAGATAGTGAGGAAAACTTGCTTCTCCGGCGGGCTTATGACGTTCTTCAGACTGCAATGGCTAGAGTTGAGGAGGAGTTTAGGCACATGCTTGTTCATAACAGGCAGCCCTTTGAGCCCGAGCACGTTTCCTTTCGTTCTACCGAAGAGGATGTTGTGGACCAGGTCTCAATCGTCTCGTTTGGGGACGATTCGTTCGAGGAGGTGATACAGAGAGATAGTATAAGCAGAGGAGCTGAGGAATATCTCATTAATTTGGTCCAACAAGATGTGATTCCTGATCTCAAATGCATTGCGAATGTGATGTTTGATTCGAATTATGGTAGAGAGTGCTCTCAAGCGTATATCAGTGTAAGAAAAGATGCCTTGGACGATTGCCTCTTCATTCTTGAAGTGGAGAAATCAAGCATCGAGGACGTGCTAAAGATGGAGTGGAGCTCCTTGAACTCCAAGATTAGAAGATGGATATGGGCTATGAAGATTTTTGTGAGGGTCTATCTTGCAAGTGAAAAAAGGTTATGTGATCAGATTTTTGGGGAGCTTGAATCGGTTAGTCCGGTTTGTTTTGCGGAGGCATCAAAGGCTTCTATATTGCAGCTTTTGAATTTTGGTGAAGCCATAGCCATCGGTCCTCACCAGCCTGAGAAGTTGCTGAGGATTCTTGATATGTACGAGGTGCTAGCTGATCTTATCCCGGATATCGATACTTTATATGCAGATGAGACCGGTTCTTGCATTAGATTTGAGAGCCAGGACGTTTTGAGGCGATTGGGCGATTGTGTAAAGTCGACATTTCTTAAATTTGAAAACGCAGTTGCTTCAAATATTTCTACCAACCCTTTTGCTGGTGGTGGAATCCACCATCTTACCAGATATGTGATGAACTATGTCAAGACCCTCACGATTTACAGTGAGACCCTTGATTTGCTCCTCAAGGACCATGACCCTGAAGATTCGATCTCGTTGTCCCCCGATATGAGCCCAGTTGCCGAAAGTTTTTCACCCATGGCTCTACACTTTCGGTCACTAGCCTCGATTCTTGAACGTAACCTTGATGATAAGTCGTTATTATACAGGGAGGATTCTTTAAGGCACCTTTTCTTGATGAACAACATACATTACATGGCCGAAAAGGTGAAGGCTTCGGAACTAAGAACTATCTTTGGGGACGGATGGATTCGCAAGCATAATTGGAGATTCCAACAGCACGCAATGAACTATGAGAGGGCTACTTGGAGTTCGATCCTCTCATTACTTAAAGATGAGGGTATTCAGAATCCGGGCTCGAACTCCGTGTCGAAAACTCTTCTCAAAGAGAGGCTGCAGAGATTTTATATAGCGTTTGAAGAGGTTTACAAGAGCCAAACGTCGTGGTTAGTACCAGATAGTCAGCTTCGAGAAGATCTAAGAATCTCAACATCGCTCAAGGTAATTCAGGCTTACCGGACTTTTGTAGGAAGGCATAGCACCCATGTTAGTGAGCGGCACATCAAGTACACAGCTGATGATCTCGAGAATTTCCTCTTGGATTTCTTTGAGGGATCCCCAAGATCATTACACAGTTTTCACAGGAGGTGA

Network for GWHGAAZE014435

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	263	618	1.00E-120

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	20.809
	SRR3591706	second leaf	12.154
	SRR3591707	mature leaf	22.283
	SRR3591708	Shoot apex	13.024
	SRR3591709	Stem	28.349
	SRR3591710	White floral bud	21.304
	SRR3591711	White flower	37.872
	SRR3591712	Green floral bud	21.703
	SRR3591713	Yellow flower	33.904
SRP173429	SRR8316895	Juvenile bud stage	11.349
	SRR8316896	Juvenile bud stage	13.908
	SRR8316897	Juvenile bud stage	7.773
	SRR8316894	Third green stage	7.715
	SRR8316900	Third green stage	22.517
	SRR8316901	Third green stage	22.761
	SRR8316898	Complete white stage	10.510
	SRR8316899	Complete white stage	40.363
	SRR8316903	Complete white stage	14.876
	SRR8316902	Silver flowering stage	9.920
	SRR8316904	Silver flowering stage	13.918
	SRR8316905	Silver flowering stage	6.263
	SRR8316906	Gold flowering stage	23.157
	SRR8316907	Gold flowering stage	23.435
	SRR8316908	Gold flowering stage	26.703
SRP132670	SRR6706286	Control	25.463
	SRR6706287	Light intensity 50%	25.730
	SRR6706288	Light intensity 20%	27.354
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	12.292
	CNS0095593	Slightly white alabastrum(diploid) 2	14.904
	CNS0095594	Slightly white alabastrum(diploid) 3	13.585
	CNS0095595	Whole white alabastrum(diploid) 2	11.070
	CNS0095596	Whole white alabastrum(diploid) 3	9.699
	CNS0095597	Whole white alabastrum(diploid) 4	9.746
	CNS0095598	Silvery flower (diploied) 1	21.817
	CNS0095599	Silvery flower (diploied) 2	14.240
	CNS0095600	Silvery flower (diploied) 3	33.399
	CNS0095601	Golden flower (diploid) 1	17.574
	CNS0095602	Golden flower (diploid) 2	33.461
	CNS0095603	Golden flower (diploid) 3	34.776
	CNS0095604	Slightly white alabastrum(tetraploid) 1	11.223
	CNS0095605	Slightly white alabastrum(tetraploid) 2	9.001
	CNS0095606	Slightly white alabastrum(tetraploid) 3	27.588
	CNS0095607	Whole white alabastrum(tetraploid) 1	8.914
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.138
	CNS0095609	Whole white alabastrum(tetraploid) 3	18.362
	CNS0095610	Silvery flower (tetraploid) 1	30.300
	CNS0095611	Silvery flower (tetraploid) 2	25.288
	CNS0095612	Silvery flower (tetraploid) 3	23.994
	CNS0095613	Golden flower (tetraploid) 1	22.099
	CNS0095614	Golden flower (tetraploid) 2	32.627
	CNS0095615	Golden flower (tetraploid) 3	20.941
CRA001975	CRR073297	Stem 1	23.885
	CRR073298	Stem 2	18.211
	CRR073299	Stem 3	17.228
	CRR073300	Leaf 1	24.455
	CRR073301	Leaf 2	23.886
	CRR073302	Leaf 3	26.747
	CRR073303	Juvenile bud 1	28.288
	CRR073304	Juvenile bud 2	28.176
	CRR073305	Juvenile bud 3	43.176
	CRR073306	Third green 1	19.463
	CRR073307	Third green 2	17.212
	CRR073308	Third green 3	19.156
	CRR073309	Second white 1	21.578
	CRR073310	Second white 2	17.296
	CRR073311	Second white 3	14.263
	CRR073312	Silver flowering 1	24.147
	CRR073313	Silver flowering 2	24.988
	CRR073314	Silver flowering 3	13.742
	CRR073315	Gold flowering 1	21.922
	CRR073316	Gold flowering 2	29.407
	CRR073317	Gold flowering 3	28.409
	CRR073318	Tawny withering 1	37.616
	CRR073319	Tawny withering 2	36.097
	CRR073320	Tawny withering 3	29.129