Detail information of GWHGAAZE014474


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU44254.10hypothetical protein MIMGU_mgv1a005959mg [Erythranthe guttata]
Swissprottr|Q9FKS8|LHT1_ARATH0.0000001Lysine histidine transporter 1
trEMBLtr|A0A022RZ48|A0A022RZ48_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU44255.1}
TAIR10AT3G30390.22E-154Transmembrane amino acid transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1269638312699169-
GWHAAZE00000004mRNA1269638312699169-
GWHAAZE00000004exon1269638312696852-
GWHAAZE00000004exon1269736512697568-
GWHAAZE00000004exon1269837612698528-
GWHAAZE00000004exon1269873712699169-
GWHAAZE00000004CDS1269873712699169-
GWHAAZE00000004CDS1269837612698528-
GWHAAZE00000004CDS1269736512697568-
GWHAAZE00000004CDS1269638312696852-
Transcript Sequence

Network for GWHGAAZE014474

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans464156.80E-56
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14207SLC38A2, SNAT2 Protein digestion and absorption map04974
Glutamatergic synapsemap04724
GABAergic synapsemap04727

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf145.986
SRR3591706second leaf56.819
SRR3591707mature leaf105.920
SRR3591708Shoot apex55.816
SRR3591709Stem369.129
SRR3591710White floral bud148.125
SRR3591711White flower261.115
SRR3591712Green floral bud92.646
SRR3591713Yellow flower241.265
SRP173429 SRR8316895Juvenile bud stage 46.842
SRR8316896Juvenile bud stage 51.177
SRR8316897Juvenile bud stage 28.632
SRR8316894Third green stage 27.143
SRR8316900Third green stage 86.685
SRR8316901Third green stage 70.561
SRR8316898Complete white stage 63.679
SRR8316899Complete white stage 137.984
SRR8316903Complete white stage 103.415
SRR8316902Silver flowering stage111.504
SRR8316904Silver flowering stage182.309
SRR8316905Silver flowering stage76.735
SRR8316906Gold flowering stage 208.104
SRR8316907Gold flowering stage 226.119
SRR8316908Gold flowering stage 238.495
SRP132670SRR6706286Control97.537
SRR6706287Light intensity 50%98.023
SRR6706288Light intensity 20%99.826
CNP0000432CNS0095592Slightly white alabastrum(diploid) 137.127
CNS0095593Slightly white alabastrum(diploid) 237.251
CNS0095594Slightly white alabastrum(diploid) 336.589
CNS0095595Whole white alabastrum(diploid) 240.535
CNS0095596Whole white alabastrum(diploid) 333.756
CNS0095597Whole white alabastrum(diploid) 442.528
CNS0095598Silvery flower (diploied) 1104.781
CNS0095599Silvery flower (diploied) 2100.933
CNS0095600Silvery flower (diploied) 3229.367
CNS0095601Golden flower (diploid) 197.820
CNS0095602Golden flower (diploid) 2229.193
CNS0095603Golden flower (diploid) 3215.645
CNS0095604Slightly white alabastrum(tetraploid) 147.538
CNS0095605Slightly white alabastrum(tetraploid) 235.361
CNS0095606Slightly white alabastrum(tetraploid) 3100.665
CNS0095607Whole white alabastrum(tetraploid) 132.743
CNS0095608Whole white alabastrum(tetraploid) 231.103
CNS0095609Whole white alabastrum(tetraploid) 375.832
CNS0095610Silvery flower (tetraploid) 1250.434
CNS0095611Silvery flower (tetraploid) 2205.376
CNS0095612Silvery flower (tetraploid) 3203.022
CNS0095613Golden flower (tetraploid) 1118.334
CNS0095614Golden flower (tetraploid) 2214.264
CNS0095615Golden flower (tetraploid) 3205.536
CRA001975CRR073297Stem 198.490
CRR073298Stem 296.011
CRR073299Stem 3124.179
CRR073300Leaf 1129.523
CRR073301Leaf 2117.170
CRR073302Leaf 3126.328
CRR073303Juvenile bud 1188.041
CRR073304Juvenile bud 2225.729
CRR073305Juvenile bud 3222.906
CRR073306Third green 1247.574
CRR073307Third green 2239.747
CRR073308Third green 3237.400
CRR073309Second white 1322.077
CRR073310Second white 2253.504
CRR073311Second white 3295.181
CRR073312Silver flowering 1354.611
CRR073313Silver flowering 2460.376
CRR073314Silver flowering 3395.505
CRR073315Gold flowering 170.603
CRR073316Gold flowering 291.664
CRR073317Gold flowering 392.805
CRR073318Tawny withering 1191.542
CRR073319Tawny withering 2132.612
CRR073320Tawny withering 3153.268