Detail information of GWHGAAZE014512


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAAX45194.14.40905E-55CYCLOIDEA-like [Triosteum himalayanum]
Swissprottr|Q9SBV6|CYCLD_ANTML9E-30Transcription factor CYCLOIDEA (Fragment)
trEMBLtr|Q2TKT0|Q2TKT0_9DIPS2E-55CYCLOIDEA-like {ECO:0000313|EMBL:AAX45194.1} (Fragment)
TAIR10AT1G67260.12E-24TCP family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1314864313149857-
GWHAAZE00000004mRNA1314864313149857-
GWHAAZE00000004exon1314918513149857-
GWHAAZE00000004exon1314864313149036-
GWHAAZE00000004CDS1314918513149857-
GWHAAZE00000004CDS1314897513149036-
GWHAAZE00000004three_prime_UTR1314864313148974-
Transcript Sequence

Network for GWHGAAZE014512

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP541177.10E-35
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.267
SRR3591706second leaf0.000
SRR3591707mature leaf0.376
SRR3591708Shoot apex0.169
SRR3591709Stem0.173
SRR3591710White floral bud6.077
SRR3591711White flower8.313
SRR3591712Green floral bud16.950
SRR3591713Yellow flower3.745
SRP173429 SRR8316895Juvenile bud stage 13.157
SRR8316896Juvenile bud stage 10.825
SRR8316897Juvenile bud stage 8.745
SRR8316894Third green stage 6.323
SRR8316900Third green stage 19.732
SRR8316901Third green stage 18.468
SRR8316898Complete white stage 3.332
SRR8316899Complete white stage 20.383
SRR8316903Complete white stage 5.314
SRR8316902Silver flowering stage1.797
SRR8316904Silver flowering stage1.231
SRR8316905Silver flowering stage0.708
SRR8316906Gold flowering stage 1.634
SRR8316907Gold flowering stage 2.120
SRR8316908Gold flowering stage 2.988
SRP132670SRR6706286Control26.075
SRR6706287Light intensity 50%26.195
SRR6706288Light intensity 20%29.424
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.756
CNS0095593Slightly white alabastrum(diploid) 216.765
CNS0095594Slightly white alabastrum(diploid) 310.449
CNS0095595Whole white alabastrum(diploid) 217.564
CNS0095596Whole white alabastrum(diploid) 313.603
CNS0095597Whole white alabastrum(diploid) 417.953
CNS0095598Silvery flower (diploied) 18.805
CNS0095599Silvery flower (diploied) 26.039
CNS0095600Silvery flower (diploied) 35.201
CNS0095601Golden flower (diploid) 16.489
CNS0095602Golden flower (diploid) 25.331
CNS0095603Golden flower (diploid) 35.228
CNS0095604Slightly white alabastrum(tetraploid) 121.339
CNS0095605Slightly white alabastrum(tetraploid) 218.677
CNS0095606Slightly white alabastrum(tetraploid) 335.494
CNS0095607Whole white alabastrum(tetraploid) 112.890
CNS0095608Whole white alabastrum(tetraploid) 217.575
CNS0095609Whole white alabastrum(tetraploid) 326.356
CNS0095610Silvery flower (tetraploid) 16.698
CNS0095611Silvery flower (tetraploid) 27.909
CNS0095612Silvery flower (tetraploid) 33.496
CNS0095613Golden flower (tetraploid) 14.783
CNS0095614Golden flower (tetraploid) 23.303
CNS0095615Golden flower (tetraploid) 31.511
CRA001975CRR073297Stem 117.274
CRR073298Stem 217.345
CRR073299Stem 311.259
CRR073300Leaf 115.339
CRR073301Leaf 217.101
CRR073302Leaf 317.324
CRR073303Juvenile bud 119.451
CRR073304Juvenile bud 28.923
CRR073305Juvenile bud 317.365
CRR073306Third green 12.095
CRR073307Third green 21.656
CRR073308Third green 32.241
CRR073309Second white 11.027
CRR073310Second white 20.738
CRR073311Second white 30.418
CRR073312Silver flowering 10.800
CRR073313Silver flowering 21.439
CRR073314Silver flowering 30.312
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.211
CRR073319Tawny withering 20.044
CRR073320Tawny withering 30.000