Gene detail

Detail information of GWHGAAZE014553

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AAU95203.1	6.7236E-116	protein S [Catharanthus roseus]
Swissprot	tr\|Q6RYA0\|SABP2_TOBAC	3E-93	Salicylic acid-binding protein 2
trEMBL	tr\|Q5XLS1\|Q5XLS1_CATRO	3E-116	Protein S {ECO:0000313\|EMBL:AAU95203.1}
TAIR10	AT2G23620.1	8E-72	methyl esterase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	13779795	13780663	-
GWHAAZE00000004	mRNA	13779795	13780663	-
GWHAAZE00000004	exon	13780298	13780663	-
GWHAAZE00000004	exon	13780055	13780189	-
GWHAAZE00000004	exon	13779795	13779983	-
GWHAAZE00000004	CDS	13780298	13780663	-
GWHAAZE00000004	CDS	13780055	13780189	-
GWHAAZE00000004	CDS	13779795	13779983	-

Transcript Sequence
>GWHTAAZE014567 ATGATAAAAGAACAGAAGCACTTTGTTACAGTACACGGTGTATGCCATGGGGCCTGGGTCTACTACAAGGTCAAGCCGAGGGTTGAGGCCGCCGGTCACCGATTCACGGCGGTGAACATGGCTGCTGCCGGCGTAAACGAGAAGAAGCTGGAGGAAGTTTCCTCACTTTACGAGTACACCAAGCCTTTGCTGGACGTTTTGGCAGCGATCCCCGAAAACGAGAAGGTGATACTGGTGGGTCACAGCGGAGGTGGGATGAGCGCCGCCCTGGGGATGGAGAAGTACCCGGAGAAGATCTCTGTGGGGGTGTTCTTGAATGCTATAATGCCAGATACCACCAATAGCCCATCTTTTGTTTTGGAGAAGTATTCCGGGGGGACTCCAGTAGATGCATGGAAGGACTCACAATTTGGCCAATTTGGTACTGACCCTCCCATCACCTCGGTCACTGTCGGCCCTAAGTTCTTGGCCGATACCCTCTACACCCTATGCCCCATTGAGGATTTGACACTGGCGACACTATTGGTAAGGCCGGGGTCATTATTTATCGAGGACTTATTGAAGGCAGATAAGTTCACAGACAAAGGATTAGGATCAGTTCCGAGAATATACATTGTATGCGATAAAGACAAGACAATACCAGTTGAATTCCAGCGCTGGATGATCGAAAATTACCCTGTCACGAGGTGA

Network for GWHGAAZE014553

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0264

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12697.8	Abhydrolase_6	9	223	6.40E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	15.713
	SRR3591706	second leaf	159.389
	SRR3591707	mature leaf	28.189
	SRR3591708	Shoot apex	104.387
	SRR3591709	Stem	1.288
	SRR3591710	White floral bud	2.796
	SRR3591711	White flower	0.882
	SRR3591712	Green floral bud	28.093
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	99.933
	SRR8316896	Juvenile bud stage	44.182
	SRR8316897	Juvenile bud stage	25.872
	SRR8316894	Third green stage	5.049
	SRR8316900	Third green stage	2.355
	SRR8316901	Third green stage	4.300
	SRR8316898	Complete white stage	0.579
	SRR8316899	Complete white stage	8.912
	SRR8316903	Complete white stage	0.551
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.081
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.006
SRP132670	SRR6706286	Control	9.234
	SRR6706287	Light intensity 50%	6.764
	SRR6706288	Light intensity 20%	6.357
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	137.512
	CNS0095593	Slightly white alabastrum(diploid) 2	82.569
	CNS0095594	Slightly white alabastrum(diploid) 3	146.364
	CNS0095595	Whole white alabastrum(diploid) 2	118.953
	CNS0095596	Whole white alabastrum(diploid) 3	3.847
	CNS0095597	Whole white alabastrum(diploid) 4	64.334
	CNS0095598	Silvery flower (diploied) 1	16.406
	CNS0095599	Silvery flower (diploied) 2	20.083
	CNS0095600	Silvery flower (diploied) 3	1.386
	CNS0095601	Golden flower (diploid) 1	1.287
	CNS0095602	Golden flower (diploid) 2	0.609
	CNS0095603	Golden flower (diploid) 3	0.439
	CNS0095604	Slightly white alabastrum(tetraploid) 1	34.488
	CNS0095605	Slightly white alabastrum(tetraploid) 2	89.793
	CNS0095606	Slightly white alabastrum(tetraploid) 3	150.151
	CNS0095607	Whole white alabastrum(tetraploid) 1	33.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.984
	CNS0095609	Whole white alabastrum(tetraploid) 3	6.563
	CNS0095610	Silvery flower (tetraploid) 1	0.035
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.432
	CNS0095613	Golden flower (tetraploid) 1	0.113
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	36.016
	CRR073298	Stem 2	38.747
	CRR073299	Stem 3	67.795
	CRR073300	Leaf 1	0.826
	CRR073301	Leaf 2	1.218
	CRR073302	Leaf 3	1.122
	CRR073303	Juvenile bud 1	5.310
	CRR073304	Juvenile bud 2	0.967
	CRR073305	Juvenile bud 3	2.335
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.058
	CRR073308	Third green 3	0.113
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	16.381
	CRR073316	Gold flowering 2	21.716
	CRR073317	Gold flowering 3	30.584
	CRR073318	Tawny withering 1	145.545
	CRR073319	Tawny withering 2	66.267
	CRR073320	Tawny withering 3	287.763