Detail information of GWHGAAZE014554


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAAU95203.16.1969E-136protein S [Catharanthus roseus]
Swissprottr|Q6RYA0|SABP2_TOBAC2E-106Salicylic acid-binding protein 2
trEMBLtr|Q5XLS1|Q5XLS1_CATRO2E-136Protein S {ECO:0000313|EMBL:AAU95203.1}
TAIR10AT2G23620.12E-83methyl esterase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1380426713805292-
GWHAAZE00000004mRNA1380426713805292-
GWHAAZE00000004exon1380426713804548-
GWHAAZE00000004exon1380462013804754-
GWHAAZE00000004exon1380492713805292-
GWHAAZE00000004CDS1380492713805292-
GWHAAZE00000004CDS1380462013804754-
GWHAAZE00000004CDS1380426713804548-
Transcript Sequence

Network for GWHGAAZE014554

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0264


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12697.8Abhydrolase_682481.40E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf200.720
SRR3591706second leaf727.402
SRR3591707mature leaf124.474
SRR3591708Shoot apex403.228
SRR3591709Stem2.579
SRR3591710White floral bud6.536
SRR3591711White flower2.026
SRR3591712Green floral bud122.196
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 320.930
SRR8316896Juvenile bud stage 181.133
SRR8316897Juvenile bud stage 85.849
SRR8316894Third green stage 22.727
SRR8316900Third green stage 14.558
SRR8316901Third green stage 30.911
SRR8316898Complete white stage 2.586
SRR8316899Complete white stage 39.919
SRR8316903Complete white stage 5.233
SRR8316902Silver flowering stage0.047
SRR8316904Silver flowering stage0.338
SRR8316905Silver flowering stage0.154
SRR8316906Gold flowering stage 0.052
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control47.078
SRR6706287Light intensity 50%28.045
SRR6706288Light intensity 20%26.091
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1639.749
CNS0095593Slightly white alabastrum(diploid) 2445.312
CNS0095594Slightly white alabastrum(diploid) 3543.945
CNS0095595Whole white alabastrum(diploid) 2558.708
CNS0095596Whole white alabastrum(diploid) 340.187
CNS0095597Whole white alabastrum(diploid) 4275.040
CNS0095598Silvery flower (diploied) 149.452
CNS0095599Silvery flower (diploied) 255.704
CNS0095600Silvery flower (diploied) 32.858
CNS0095601Golden flower (diploid) 11.120
CNS0095602Golden flower (diploid) 20.310
CNS0095603Golden flower (diploid) 30.215
CNS0095604Slightly white alabastrum(tetraploid) 1210.903
CNS0095605Slightly white alabastrum(tetraploid) 2494.208
CNS0095606Slightly white alabastrum(tetraploid) 3924.325
CNS0095607Whole white alabastrum(tetraploid) 1114.637
CNS0095608Whole white alabastrum(tetraploid) 242.710
CNS0095609Whole white alabastrum(tetraploid) 359.180
CNS0095610Silvery flower (tetraploid) 10.154
CNS0095611Silvery flower (tetraploid) 20.146
CNS0095612Silvery flower (tetraploid) 30.063
CNS0095613Golden flower (tetraploid) 10.331
CNS0095614Golden flower (tetraploid) 20.269
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 1108.295
CRR073298Stem 2152.860
CRR073299Stem 3202.636
CRR073300Leaf 18.131
CRR073301Leaf 26.811
CRR073302Leaf 38.078
CRR073303Juvenile bud 136.641
CRR073304Juvenile bud 29.269
CRR073305Juvenile bud 324.384
CRR073306Third green 11.077
CRR073307Third green 24.198
CRR073308Third green 32.571
CRR073309Second white 10.051
CRR073310Second white 20.150
CRR073311Second white 30.378
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.115
CRR073314Silver flowering 30.173
CRR073315Gold flowering 164.986
CRR073316Gold flowering 272.786
CRR073317Gold flowering 3115.261
CRR073318Tawny withering 1610.901
CRR073319Tawny withering 2322.767
CRR073320Tawny withering 31090.818