Detail information of GWHGAAZE014563


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG26276.11.07578E-98LOB domain-containing 36 -like protein [Gossypium arboreum]
Swissprottr|Q9FKZ3|LBD36_ARATH2E-77LOB domain-containing protein 36
trEMBLtr|A0A067DDH1|A0A067DDH1_CITSI4E-94Uncharacterized protein {ECO:0000313|EMBL:KDO37062.1}
TAIR10AT5G66870.15E-60ASYMMETRIC LEAVES 2-like 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1391093713911878-
GWHAAZE00000004mRNA1391093713911878-
GWHAAZE00000004exon1391141813911878-
GWHAAZE00000004exon1391122013911336-
GWHAAZE00000004exon1391093713911189-
GWHAAZE00000004CDS1391141813911878-
GWHAAZE00000004CDS1391122013911336-
GWHAAZE00000004CDS1391093713911189-
Transcript Sequence

Network for GWHGAAZE014563

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.15LOB71025.40E-41
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.752
SRR3591706second leaf0.516
SRR3591707mature leaf0.200
SRR3591708Shoot apex5.029
SRR3591709Stem8.889
SRR3591710White floral bud2.951
SRR3591711White flower0.505
SRR3591712Green floral bud12.431
SRR3591713Yellow flower0.321
SRP173429 SRR8316895Juvenile bud stage 6.652
SRR8316896Juvenile bud stage 14.467
SRR8316897Juvenile bud stage 6.470
SRR8316894Third green stage 4.870
SRR8316900Third green stage 13.423
SRR8316901Third green stage 14.397
SRR8316898Complete white stage 0.710
SRR8316899Complete white stage 2.732
SRR8316903Complete white stage 0.368
SRR8316902Silver flowering stage0.052
SRR8316904Silver flowering stage0.311
SRR8316905Silver flowering stage0.046
SRR8316906Gold flowering stage 0.545
SRR8316907Gold flowering stage 0.496
SRR8316908Gold flowering stage 0.289
SRP132670SRR6706286Control9.269
SRR6706287Light intensity 50%9.606
SRR6706288Light intensity 20%9.266
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.692
CNS0095593Slightly white alabastrum(diploid) 211.975
CNS0095594Slightly white alabastrum(diploid) 318.459
CNS0095595Whole white alabastrum(diploid) 216.700
CNS0095596Whole white alabastrum(diploid) 318.451
CNS0095597Whole white alabastrum(diploid) 416.132
CNS0095598Silvery flower (diploied) 10.255
CNS0095599Silvery flower (diploied) 20.868
CNS0095600Silvery flower (diploied) 30.724
CNS0095601Golden flower (diploid) 10.372
CNS0095602Golden flower (diploid) 20.219
CNS0095603Golden flower (diploid) 30.584
CNS0095604Slightly white alabastrum(tetraploid) 112.852
CNS0095605Slightly white alabastrum(tetraploid) 216.167
CNS0095606Slightly white alabastrum(tetraploid) 32.655
CNS0095607Whole white alabastrum(tetraploid) 119.384
CNS0095608Whole white alabastrum(tetraploid) 217.829
CNS0095609Whole white alabastrum(tetraploid) 312.019
CNS0095610Silvery flower (tetraploid) 10.513
CNS0095611Silvery flower (tetraploid) 20.592
CNS0095612Silvery flower (tetraploid) 30.605
CNS0095613Golden flower (tetraploid) 10.125
CNS0095614Golden flower (tetraploid) 20.780
CNS0095615Golden flower (tetraploid) 30.191
CRA001975CRR073297Stem 111.314
CRR073298Stem 29.547
CRR073299Stem 35.810
CRR073300Leaf 110.993
CRR073301Leaf 210.856
CRR073302Leaf 35.151
CRR073303Juvenile bud 15.926
CRR073304Juvenile bud 24.805
CRR073305Juvenile bud 33.715
CRR073306Third green 10.930
CRR073307Third green 20.706
CRR073308Third green 31.674
CRR073309Second white 10.100
CRR073310Second white 20.520
CRR073311Second white 30.682
CRR073312Silver flowering 11.741
CRR073313Silver flowering 22.011
CRR073314Silver flowering 31.056
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.046
CRR073317Gold flowering 30.171
CRR073318Tawny withering 12.921
CRR073319Tawny withering 23.288
CRR073320Tawny withering 34.816