Detail information of GWHGAAZE014664


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006376791.13.52E-100hypothetical protein POPTR_0012s06430g [Populus trichocarpa]
Swissprottr|Q9SZF7|SHR_ARATH1E-79Protein SHORT-ROOT
trEMBLtr|B9NAS9|B9NAS9_POPTR1E-100Uncharacterized protein {ECO:0000313|EMBL:ERP54588.1}
TAIR10AT4G37650.16E-67GRAS family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1630149116302042+
GWHAAZE00000004mRNA1630149116302042+
GWHAAZE00000004exon1630149116302042+
GWHAAZE00000004CDS1630149116302042+
Transcript Sequence

Network for GWHGAAZE014664

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS251721.90E-42
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.267
SRR3591706second leaf14.158
SRR3591707mature leaf5.061
SRR3591708Shoot apex17.089
SRR3591709Stem8.929
SRR3591710White floral bud3.744
SRR3591711White flower0.695
SRR3591712Green floral bud6.352
SRR3591713Yellow flower0.774
SRP173429 SRR8316895Juvenile bud stage 3.776
SRR8316896Juvenile bud stage 2.665
SRR8316897Juvenile bud stage 0.862
SRR8316894Third green stage 1.947
SRR8316900Third green stage 3.849
SRR8316901Third green stage 1.978
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 6.465
SRR8316903Complete white stage 1.137
SRR8316902Silver flowering stage0.110
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.071
SRR8316906Gold flowering stage 0.178
SRR8316907Gold flowering stage 0.612
SRR8316908Gold flowering stage 0.060
SRP132670SRR6706286Control4.603
SRR6706287Light intensity 50%4.221
SRR6706288Light intensity 20%5.313
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.029
CNS0095593Slightly white alabastrum(diploid) 23.120
CNS0095594Slightly white alabastrum(diploid) 32.205
CNS0095595Whole white alabastrum(diploid) 20.836
CNS0095596Whole white alabastrum(diploid) 31.088
CNS0095597Whole white alabastrum(diploid) 40.489
CNS0095598Silvery flower (diploied) 10.502
CNS0095599Silvery flower (diploied) 20.839
CNS0095600Silvery flower (diploied) 30.189
CNS0095601Golden flower (diploid) 10.522
CNS0095602Golden flower (diploid) 20.876
CNS0095603Golden flower (diploid) 30.495
CNS0095604Slightly white alabastrum(tetraploid) 14.165
CNS0095605Slightly white alabastrum(tetraploid) 24.145
CNS0095606Slightly white alabastrum(tetraploid) 311.913
CNS0095607Whole white alabastrum(tetraploid) 11.904
CNS0095608Whole white alabastrum(tetraploid) 20.122
CNS0095609Whole white alabastrum(tetraploid) 33.513
CNS0095610Silvery flower (tetraploid) 12.190
CNS0095611Silvery flower (tetraploid) 22.204
CNS0095612Silvery flower (tetraploid) 31.758
CNS0095613Golden flower (tetraploid) 11.707
CNS0095614Golden flower (tetraploid) 20.942
CNS0095615Golden flower (tetraploid) 31.298
CRA001975CRR073297Stem 114.079
CRR073298Stem 213.863
CRR073299Stem 332.301
CRR073300Leaf 19.421
CRR073301Leaf 28.044
CRR073302Leaf 37.756
CRR073303Juvenile bud 110.997
CRR073304Juvenile bud 22.994
CRR073305Juvenile bud 313.059
CRR073306Third green 10.785
CRR073307Third green 20.397
CRR073308Third green 32.879
CRR073309Second white 11.248
CRR073310Second white 20.701
CRR073311Second white 30.179
CRR073312Silver flowering 10.117
CRR073313Silver flowering 20.600
CRR073314Silver flowering 30.000
CRR073315Gold flowering 16.990
CRR073316Gold flowering 212.599
CRR073317Gold flowering 311.094
CRR073318Tawny withering 135.174
CRR073319Tawny withering 28.463
CRR073320Tawny withering 340.235