Gene detail

Detail information of GWHGAAZE014696

Functional Annotation

Database	Orthologs	Annotation
Nr	CDP18491.1	unnamed protein product [Coffea canephora]
trEMBL	tr\|A0A068VCM7\|A0A068VCM7_COFCA	Coffea canephora DH200=94 genomic scaffold, scaffold_244 {ECO:0000313\|EMBL:CDP18491.1}
TAIR10	AT3G48770.1	DNA binding;ATP binding

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	16791125	16797665	+
GWHAAZE00000004	mRNA	16791125	16797665	+
GWHAAZE00000004	exon	16791125	16791256	+
GWHAAZE00000004	exon	16791416	16791626	+
GWHAAZE00000004	exon	16792817	16794595	+
GWHAAZE00000004	exon	16794727	16797665	+
GWHAAZE00000004	CDS	16791125	16791256	+
GWHAAZE00000004	CDS	16791416	16791626	+
GWHAAZE00000004	CDS	16792817	16794595	+
GWHAAZE00000004	CDS	16794727	16797665	+

Transcript Sequence
>GWHTAAZE014710 ATGGCTGCGACTTTCAGTACCAGGAAGAAAAAAGGCGAAGAAGCAAGGCAGCACACAGAAGAAATAAGGAAACAGAAGTTCTCAATCGGTGAAAAAATACCAAATCCACTTACTCAAGATTTACACAATGCTAATGCGGAAGATAATAAATACTTGGGTGGGGTGGAACCAACGCTGGAGTTTGTGATTACGAGCAACGACATAGCTGGGGTTGGCGCACCTGCAACTCTTTTAGTTTTCAACAATGAGGTCGGATTCTCTAAGAAGAACATCGATTCACTTTGCAGTATTGGCTGTTCCACTAAGAAAGGACTTAAATGCCAGGGCTACATTGGTGAAAAAGGTATTGGATTTAAGAGTGTATTTCTTGTCAGTGCATGGCCTCACATATTTAGCAACGGCTACCAAATCAGGTTCAGTGAAGTTCCCACTCAAAAATGCGGAATTGGGTACATTGTCCCCGAATGGATCGAGAGGAAACCGTCTGTATCAGATCTGCAAAATATTTATGGTTCTGACAAGGTACTCCCGAATACTACAATGATTCTACCCCTGAAGCCCGAGAAAGTGGAAGCTGTAAAGAAAGAGCTTTCAGAAATCCATCCGGAGGTCCTTCTTTTCTTACTCAAGATCAAGAAATTGTCTGTAAGAGAACACAGTGGTGGTTCTTCCACTGACTCTGTTTCTGCTGTATCTATTACCAGTGAGACAAATCCTGTTCCTTTAAGGAGTCAAGAGGCAGATTCCCGATTAGTCCATCTTTCGTATGACCAAGTGTCGGGTGCGGCCAGTTGTTGCTATTATCTACAGAAACAAGTTTTTCCAGTGAGAGCTGAGAATGTGGTGAGTTCAAGAAAGGATATAAAAGAATGGGTTATCTCTATAGCTTTCCCGTTTGGCGAAAGACTGAACAGAGGGGGGACCTCAACAGTCGGCATATTTGCCTTTTTGCCAACTTCGATGGTGACCAATTTCCCGTTCATAGTGCAAGCTGACTTCATACTTGCTTCTTCGAGAGAAACAATAAGTTTGGATAACAAGTGGAATATGGGAATCCTGGACTACGTGCCTCGCACTTTTGTCAGTGCACTAGTTACTTGTATGAAATCCACTGAAACAGCCGAGTTCTTTTCCGTTGCTCAAGTGCTCAACTTCTTGCCTGTAAAGACATCTCCTTACAAAGAGCTTAATGGGGTGAGGGAGATAATCAAAACTATGTTAACGAAGAAGCATATTGTACCGTACGAGTCATTCTGTAATAAAATCATTAGTTTCTGTGAACCAAATAATGCGATTCGGATCTTGCCTGAGTTCAGGAAAATCCTGCTGACCATACTGGGTAGTGATGCACCAATGAGGGATATCTCTTCCCAGCAGAGGTTTGTCTTGCTTAAATCAGTGGACAGTAGTCAATACGATCAAGTTTGGGAGTTTCTTGGAGTTCCTAATGCAGGTGATTGTAATGAATGGTATGGGAACTGCATTCTAGTGTGCAATTTAATTTCTCAGGCTTCAACAGATATGTATGTTGAGCTTCTTTGCTTTGTAGCTGTTAACTGGAAATCTTTGCCCCTCAAGTCTGTTAGTGACTTACCTCTTCTCAAATGCATTACTAATTGCGGAGAGCTGATCCAATGTAGCCTGTCGCAAACTAAAAGTGGGAAATCGAAGATTCGTCTTGTGTGGGATGTTGAAAAACATGCATGGCTAAATAAATGGAATCTAGCGATGGGATGCCCAAACAATATGCTTTTCTTTCCCAATGATGTAGTTACTGCTATTTGTGCTAATTATAGACAGCATATACTGAGGCAATGGCTAACATCTAAGATGAACGTGGTGGTTACTAATGTTTCTACTTACTGCTCCAACGTTTGTTGCCTTCTCAAAACGACTAAGGATCCAAAACTTGTTGTTTTGTTCTGTCATTTCATTTACCATTCCAGTTTGAAGAATTACATCGCAATCAACGAAATATCTTGGTGCTTGGGTTCATTGCCTGTTGTTGACATGTACAGAAATGTGGTGCAATGCACCAAATCTTTAGTACCTGCAAGCGGGAGCAGATGGATGAAACTGTTTGGTTCTAAAAATGCATATACCAAGGAAGCTTTTATCACAAATGCAGAGTTGAAATTGGCTTCGACTCAACTAACTAATGATCAAGCTCTGTTGCTTCTGGATTGGATTCGAAATTTGAGAGCCAGAAAGTATAGTTTACCCGTAAGATTCATTGATAGCATAAAAACGGGGAAATGGGTGAAAACTCACTCTGGCTTTAGTCCTCCAATCAGATGCTTTCTTTGTGATGGAGCCGAAATATCTACGCTGTTGGGAATCGCAAAAAGTATTTTGGTTTTATCAGCTATAGATCAAGAATATTACAGGGGCCAGATAAGATCATTCAAAGATGAGCTGATGTCCGTAGGTGTAAAGATGAATTCTGAAGACATGTATCAGCTAATTGCTGATACACTTGAGCACCGTGCTTCTATTGGCATGACCAGTAAAGTTGCAGTATCACTACTGAGCTTTGTCAAGTATTCAAAGGACAATAATAAGCTCAACGATGATTTTTTGAAGACACTGAAAGAGGGGAAATGGTTGAAGGCGCGTAAGGGTTATGCGGCTCCTTCTGGATCTGTTTTTCTGGCATCTTCTTTTGCAGAAGCTCTTGGACAAATTACAGATCTAAATGTTGCTGACAATATATACTATGGAGGCCAGCTAGATTCTTTTGTGAATGAACTCAAGTTACTGGGTGTTCTCATAGATGAAGGAGATGTTTATAAGCTACTAACAGAACATTTCAGTTTTCCTGAAGATCTCTCTACTATGATGAAGGAAGGTGCCTTGGTCCTATTAGAATCAATCCGGCATTTGGGCCCTAGTGCTTTGGGCTTGATAGAGAAGCTTATTTGCAAGCGGTGGTTGAAGACTAGTTCTGGTTTTAGTTGCCCATCGGAATCCCTTCTGGCCGATAGCAAGTGGGGCAACCTGTTGAATATTGTCCCACTACCTATCATCGATGAAGCGTTTTATGGAACCAGGATCAGGTCATACAAGGTGGAACTGGAGGAAATGGGTGTCACAGTAGATCTCCTTGGAGCATCTAAAATGCTCTCTGCTAAATTAAAGTTGATGTGTTCCTCGAGCAAATTAACCAGTACGAGTGTGATATCTCTCCTAAACTTTTTGAAGTGCATGGGTAAAGCAGAGCCTTCTTTGCTGCCCAATATAATTAGCTCTTTGTTGGGAGAGAAGTGGCTCAAGACCTCTCATGGCTATAATTCTGCTGCAGACTGTATTTTGTATGATTCAGAATGGAAAACGGTTTTACAGTTTGTGTATCTTCCATTTGTTGATGCTGCCTTCTATGGGCCCGACATCTTTGTATTCAAAGATGAGCTGAAGATGTTGGGGGTTGTGGTTGATTTCAGTGAAGGAGCTCATTTTGTTGCAGAGGATCTAGAGCTGCCAAAGGAACCGGCATTAATAACACCACAATGCGCTCTCTTATTGCTGCGATGTTTCAGGTCCCTCCGAAACAGCAGCAAGGCAAGCGACCAGTCACTGGTTGAACTTTTTCGCATTAAATTGAAAGGAAGCAAATGGATCAAAACCCACATGGGCTACAAATCCCCGGATAAATCGCTACTTTTTAATCCAGAGTGGGAGTGTTCTTTAGAACTAGATGATGCTCCGTTCATTGATCAAAGCTTTTACGGTACTCTTAGTGCGTTGGAGAAGGATGATCTCAAAGCCATAGGTGTGAAAGCAGATGTGGAGGAAGTTTGTTCTATTATTTACCAGTTTCTTGGTTTGCATATTCGAACTTGTGCTATATTAAGAATATACAAGTTTCTGAACAAAATGAAGTGGAAACCAAAAGCAGAGGATATATCTTGTGCTCGGTTTTGGATTCCAGATCAAGAATTTATTGATTGGGGACGGTGGGTTTTGTCTTGCAAGTGTGTACTTCACGATCAAAGCCATCTATTTGGATCTCATCTGCATGCTCTTGATCAGTACTATGATGTGGAGTTGTTATCATATTTTTCATCATCGTTTGGAGTTGCTTCAAGTCCATCCTGTGATTATTATGTAAAGCTGTGGAATGATTGGGCTACCTGTAAGCACAATGTGTCTCATATGGAACTGAATTCCTTCTGGGGACACATAGCAGAGAATTGGAACAAGGAAGTGGAAAGGACTTTTACAACTGGAATAACCATGCTTCCTGCAAGTACTAGTGCTGGGAAAATCCAGTTCATGAATAAGGAACAAGTTTTTATCCCTGATGATCTACAACTTAAGAAGTCATTTTCAGAAGCTACTGAAATTTCATTATTCGTGTGGTTCCCTCAGAATGGCACGTCATCAGTTTCTCCCACAAAACTATCCAAGATCTACAGAAAAATCGGAGTTCGGAAAATATCTGAAGCTGTGAAGGTCCACCCGAATACCATTTTAGGAAAATATAAATCCGAAACAATGGATTTGAAACATGGTCTGGTTGGGAAAGGCTTGACTAAAATTGTGTTGGGTTTCCTTGCAAGTCCTCTTATCAATATGGCGGTGGCAGAGAGACACAAGGTGGCAAGTTCTCTCATCAACATGTCAGTTTTTGGCTGTGATGAACCAATCACAGTTTGCTATGGTTTACACTTGCACTCCCAAAGAAACTTGTACGTTGAAATTACACGAATGGTATTCTGGGAGAAGAATAACAGGAGATTAATTGTTCACAAACCAAGCTGGGAAAGTGGTAACAAAAACATGGAATTTGTTTCTAATTTTGCCCGAGCAATATCAGAAGCTGTTTTGCCTACTACTGATCTTGTTAACCGCCTTTTCCCTATAATAAAGATGGCTTTTGCGTTTGGATTTAGAGAGGAGGATGTGGACTTCTTGCTGGTGACCGAAAATCTAGAGTTACCTCCTGACGATGAAGAGTTTGTTGATCGGGCATCTGCTCGTGTTGAGGACCCAACTATTTTAAAAAGGGGCAGGAGCAAATTTTCAACCTTGGAAGAACCTTCCAAAAAGAGGTTCACATGA

Network for GWHGAAZE014696

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0098

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAZE014703
MAATFSTRKKKGEEARQHTEEIRKQKFSIGEKIPNPLTQDLHNANAEDNKYLGGVEPTLEFVITSNDIAGVGAPATLLVFNNEVGFSKKNIDSLCSIGCSTKKGLKCQGYIGEKGIGFKSVFLVSAWPHIFSNGYQIRFSEVPTQKCGIGYIVPEWIERKPSVSDLQNIYGSDKVLPNTTMILPLKPEKVEAVKKELSEIHPEVLLFLLKIKKLSVREHSGGSSTDSVSAVSITSETNPVPLRSQEADSRLVHLSYDQVSGAASCCYYLQKQVFPVRAENVVSSRKDIKEWVISIAFPFGERLNRGGTSTVGIFAFLPTSMVTNFPFIVQADFILASSRETISLDNKWNMGILDYVPRTFVSALVTCMKSTETAEFFSVAQVLNFLPVKTSPYKELNGVREIIKTMLTKKHIVPYESFCNKIISFCEPNNAIRILPEFRKILLTILGSDAPMRDISSQQRFVLLKSVDSSQYDQVWEFLGVPNAGDCNEWYGNCILVCNLISQASTDMYVELLCFVAVNWKSLPLKSVSDLPLLKCITNCGELIQCSLSQTKSGKSKIRLVWDVEKHAWLNKWNLAMGCPNNMLFFPNDVVTAICANYRQHILRQWLTSKMNVVVTNVSTYCSNVCCLLKTTKDPKLVVLFCHFIYHSSLKNYIAINEISWCLGSLPVVDMYRNVVQCTKSLVPASGSRWMKLFGSKNAYTKEAFITNAELKLASTQLTNDQALLLLDWIRNLRARKYSLPVRFIDSIKTGKWVKTHSGFSPPIRCFLCDGAEISTLLGIAKSILVLSAIDQEYYRGQIRSFKDELMSVGVKMNSEDMYQLIADTLEHRASIGMTSKVAVSLLSFVKYSKDNNKLNDDFLKTLKEGKWLKARKGYAAPSGSVFLASSFAEALGQITDLNVADNIYYGGQLDSFVNELKLLGVLIDEGDVYKLLTEHFSFPEDLSTMMKEGALVLLESIRHLGPSALGLIEKLICKRWLKTSSGFSCPSESLLADSKWGNLLNIVPLPIIDEAFYGTRIRSYKVELEEMGVTVDLLGASKMLSAKLKLMCSSSKLTSTSVISLLNFLKCMGKAEPSLLPNIISSLLGEKWLKTSHGYNSAADCILYDSEWKTVLQFVYLPFVDAAFYGPDIFVFKDELKMLGVVVDFSEGAHFVAEDLELPKEPALITPQCALLLLRCFRSLRNSSKASDQSLVELFRIKLKGSKWIKTHMGYKSPDKSLLFNPEWECSLELDDAPFIDQSFYGTLSALEKDDLKAIGVKADVEEVCSIIYQFLGLHIRTCAILRIYKFLNKMKWKPKAEDISCARFWIPDQEFIDWGRWVLSCKCVLHDQSHLFGSHLHALDQYYDVELLSYFSSSFGVASSPSCDYYVKLWNDWATCKHNVSHMELNSFWGHIAENWNKEVERTFTTGITMLPASTSAGKIQFMNKEQVFIPDDLQLKKSFSEATEISLFVWFPQNGTSSVSPTKLSKIYRKIGVRKISEAVKVHPNTILGKYKSETMDLKHGLVGKGLTKIVLGFLASPLINMAVAERHKVASSLINMSVFGCDEPITVCYGLHLHSQRNLYVEITRMVFWEKNNRRLIVHKPSWESGNKNMEFVSNFARAISEAVLPTTDLVNRLFPIIKMAFAFGFREEDVDFLLVTENLELPPDDEEFVDRASARVEDPTILKRGRSKFSTLEEPSKKRFT

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.020
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.044
	SRR3591711	White flower	0.074
	SRR3591712	Green floral bud	0.076
	SRR3591713	Yellow flower	0.041
SRP173429	SRR8316895	Juvenile bud stage	0.120
	SRR8316896	Juvenile bud stage	0.162
	SRR8316897	Juvenile bud stage	0.019
	SRR8316894	Third green stage	0.120
	SRR8316900	Third green stage	0.251
	SRR8316901	Third green stage	0.144
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.186
	SRR8316903	Complete white stage	0.020
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.008
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.045
SRP132670	SRR6706286	Control	0.097
	SRR6706287	Light intensity 50%	0.117
	SRR6706288	Light intensity 20%	0.179
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.258
	CNS0095593	Slightly white alabastrum(diploid) 2	0.236
	CNS0095594	Slightly white alabastrum(diploid) 3	0.269
	CNS0095595	Whole white alabastrum(diploid) 2	0.208
	CNS0095596	Whole white alabastrum(diploid) 3	0.297
	CNS0095597	Whole white alabastrum(diploid) 4	0.228
	CNS0095598	Silvery flower (diploied) 1	0.004
	CNS0095599	Silvery flower (diploied) 2	0.052
	CNS0095600	Silvery flower (diploied) 3	0.052
	CNS0095601	Golden flower (diploid) 1	0.024
	CNS0095602	Golden flower (diploid) 2	0.044
	CNS0095603	Golden flower (diploid) 3	0.006
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.074
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.063
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.043
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.060
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.052
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.008
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.009
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.434
	CRR073298	Stem 2	0.445
	CRR073299	Stem 3	0.313
	CRR073300	Leaf 1	0.191
	CRR073301	Leaf 2	0.277
	CRR073302	Leaf 3	0.185
	CRR073303	Juvenile bud 1	0.195
	CRR073304	Juvenile bud 2	0.022
	CRR073305	Juvenile bud 3	0.161
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.009
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000