Detail information of GWHGAAZE014701


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002263389.20PREDICTED: lysosomal Pro-X carboxypeptidase [Vitis vinifera]
Swissprottr|Q1PF50|EDA2_ARATH3E-24Probable serine protease EDA2 (Precursor)
trEMBLtr|D7TG96|D7TG96_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI29519.3}
TAIR10AT5G65760.10Serine carboxypeptidase S28 family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1684849516855128-
GWHAAZE00000004mRNA1684849516855128-
GWHAAZE00000004exon1685463116855128-
GWHAAZE00000004exon1685207316852259-
GWHAAZE00000004exon1685181516851948-
GWHAAZE00000004exon1685160316851715-
GWHAAZE00000004exon1685131516851438-
GWHAAZE00000004exon1685074516850894-
GWHAAZE00000004exon1685021016850365-
GWHAAZE00000004exon1684928916849368-
GWHAAZE00000004exon1684914316849192-
GWHAAZE00000004exon1684849516848634-
GWHAAZE00000004five_prime_UTR1685502116855128-
GWHAAZE00000004CDS1685463116855020-
GWHAAZE00000004CDS1685207316852259-
GWHAAZE00000004CDS1685181516851948-
GWHAAZE00000004CDS1685160316851715-
GWHAAZE00000004CDS1685131516851438-
GWHAAZE00000004CDS1685074516850894-
GWHAAZE00000004CDS1685021016850365-
GWHAAZE00000004CDS1684928916849368-
GWHAAZE00000004CDS1684914316849192-
GWHAAZE00000004CDS1684849516848634-
Transcript Sequence

Network for GWHGAAZE014701

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05577.13Peptidase_S28624844.50E-84
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01285PRCP Renin-angiotensin system map04614
Protein digestion and absorptionmap04974

Gene Ontology

GO term OntologyName
GO:0006508biological_processproteolysis
GO:0008236molecular_functionserine-type peptidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.243
SRR3591706second leaf13.556
SRR3591707mature leaf12.920
SRR3591708Shoot apex28.063
SRR3591709Stem39.012
SRR3591710White floral bud20.800
SRR3591711White flower18.013
SRR3591712Green floral bud20.893
SRR3591713Yellow flower6.445
SRP173429 SRR8316895Juvenile bud stage 20.424
SRR8316896Juvenile bud stage 27.887
SRR8316897Juvenile bud stage 10.073
SRR8316894Third green stage 12.454
SRR8316900Third green stage 27.919
SRR8316901Third green stage 23.600
SRR8316898Complete white stage 4.954
SRR8316899Complete white stage 38.741
SRR8316903Complete white stage 8.971
SRR8316902Silver flowering stage3.015
SRR8316904Silver flowering stage4.268
SRR8316905Silver flowering stage2.489
SRR8316906Gold flowering stage 7.217
SRR8316907Gold flowering stage 8.629
SRR8316908Gold flowering stage 6.896
SRP132670SRR6706286Control37.612
SRR6706287Light intensity 50%35.461
SRR6706288Light intensity 20%37.793
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.952
CNS0095593Slightly white alabastrum(diploid) 223.226
CNS0095594Slightly white alabastrum(diploid) 322.512
CNS0095595Whole white alabastrum(diploid) 220.510
CNS0095596Whole white alabastrum(diploid) 314.570
CNS0095597Whole white alabastrum(diploid) 418.202
CNS0095598Silvery flower (diploied) 127.292
CNS0095599Silvery flower (diploied) 221.847
CNS0095600Silvery flower (diploied) 324.963
CNS0095601Golden flower (diploid) 124.672
CNS0095602Golden flower (diploid) 225.687
CNS0095603Golden flower (diploid) 324.555
CNS0095604Slightly white alabastrum(tetraploid) 129.993
CNS0095605Slightly white alabastrum(tetraploid) 219.819
CNS0095606Slightly white alabastrum(tetraploid) 346.626
CNS0095607Whole white alabastrum(tetraploid) 116.529
CNS0095608Whole white alabastrum(tetraploid) 212.855
CNS0095609Whole white alabastrum(tetraploid) 326.054
CNS0095610Silvery flower (tetraploid) 117.673
CNS0095611Silvery flower (tetraploid) 226.263
CNS0095612Silvery flower (tetraploid) 37.216
CNS0095613Golden flower (tetraploid) 16.555
CNS0095614Golden flower (tetraploid) 211.814
CNS0095615Golden flower (tetraploid) 33.271
CRA001975CRR073297Stem 127.828
CRR073298Stem 229.148
CRR073299Stem 332.296
CRR073300Leaf 128.982
CRR073301Leaf 224.645
CRR073302Leaf 327.905
CRR073303Juvenile bud 127.024
CRR073304Juvenile bud 215.867
CRR073305Juvenile bud 336.379
CRR073306Third green 10.951
CRR073307Third green 21.158
CRR073308Third green 31.208
CRR073309Second white 11.538
CRR073310Second white 21.950
CRR073311Second white 31.194
CRR073312Silver flowering 10.582
CRR073313Silver flowering 20.493
CRR073314Silver flowering 30.902
CRR073315Gold flowering 113.146
CRR073316Gold flowering 219.416
CRR073317Gold flowering 315.321
CRR073318Tawny withering 121.204
CRR073319Tawny withering 216.506
CRR073320Tawny withering 315.233