Detail information of GWHGAAZE014730


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009597685.10PREDICTED: probable cytosolic oligopeptidase A [Nicotiana tomentosiformis]
Swissprottr|Q94AM1|OOPDA_ARATH0Organellar oligopeptidase A, chloroplastic/mitochondrial (Precursor)
trEMBLtr|K4BCV6|K4BCV6_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc02g091580.2.1}
TAIR10AT5G65620.10Zincin-like metalloproteases family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1758927817599843-
GWHAAZE00000004mRNA1758927817599843-
GWHAAZE00000004exon1759948717599843-
GWHAAZE00000004exon1759902017599187-
GWHAAZE00000004exon1759795517598078-
GWHAAZE00000004exon1759739717597473-
GWHAAZE00000004exon1759631917596462-
GWHAAZE00000004exon1759597117596201-
GWHAAZE00000004exon1759560317595693-
GWHAAZE00000004exon1759482317594944-
GWHAAZE00000004exon1759392717594034-
GWHAAZE00000004exon1759358617593831-
GWHAAZE00000004exon1759248017592625-
GWHAAZE00000004exon1759186217591979-
GWHAAZE00000004exon1759077917590938-
GWHAAZE00000004exon1759060217590633-
GWHAAZE00000004exon1759045317590518-
GWHAAZE00000004exon1759011117590182-
GWHAAZE00000004exon1758927817589640-
GWHAAZE00000004CDS1759948717599843-
GWHAAZE00000004CDS1759902017599187-
GWHAAZE00000004CDS1759795517598078-
GWHAAZE00000004CDS1759739717597473-
GWHAAZE00000004CDS1759631917596462-
GWHAAZE00000004CDS1759597117596201-
GWHAAZE00000004CDS1759560317595693-
GWHAAZE00000004CDS1759482317594944-
GWHAAZE00000004CDS1759392717594034-
GWHAAZE00000004CDS1759358617593831-
GWHAAZE00000004CDS1759248017592625-
GWHAAZE00000004CDS1759186217591979-
GWHAAZE00000004CDS1759077917590938-
GWHAAZE00000004CDS1759060217590633-
GWHAAZE00000004CDS1759045317590518-
GWHAAZE00000004CDS1759011117590182-
GWHAAZE00000004CDS1758955417589640-
GWHAAZE00000004three_prime_UTR1758927817589553-
Transcript Sequence

Network for GWHGAAZE014730

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0038


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01432.21Peptidase_M33147741.60E-137
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508biological_processproteolysis
GO:0004222molecular_functionmetalloendopeptidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf76.553
SRR3591706second leaf60.210
SRR3591707mature leaf64.248
SRR3591708Shoot apex69.879
SRR3591709Stem59.432
SRR3591710White floral bud76.921
SRR3591711White flower82.776
SRR3591712Green floral bud84.804
SRR3591713Yellow flower61.076
SRP173429 SRR8316895Juvenile bud stage 47.420
SRR8316896Juvenile bud stage 64.828
SRR8316897Juvenile bud stage 36.228
SRR8316894Third green stage 29.240
SRR8316900Third green stage 98.660
SRR8316901Third green stage 86.083
SRR8316898Complete white stage 32.333
SRR8316899Complete white stage 86.409
SRR8316903Complete white stage 52.890
SRR8316902Silver flowering stage37.307
SRR8316904Silver flowering stage46.133
SRR8316905Silver flowering stage22.912
SRR8316906Gold flowering stage 77.453
SRR8316907Gold flowering stage 78.341
SRR8316908Gold flowering stage 99.657
SRP132670SRR6706286Control86.936
SRR6706287Light intensity 50%85.305
SRR6706288Light intensity 20%94.597
CNP0000432CNS0095592Slightly white alabastrum(diploid) 144.386
CNS0095593Slightly white alabastrum(diploid) 244.386
CNS0095594Slightly white alabastrum(diploid) 345.150
CNS0095595Whole white alabastrum(diploid) 245.260
CNS0095596Whole white alabastrum(diploid) 351.008
CNS0095597Whole white alabastrum(diploid) 444.717
CNS0095598Silvery flower (diploied) 151.440
CNS0095599Silvery flower (diploied) 253.384
CNS0095600Silvery flower (diploied) 393.525
CNS0095601Golden flower (diploid) 145.761
CNS0095602Golden flower (diploid) 281.073
CNS0095603Golden flower (diploid) 373.236
CNS0095604Slightly white alabastrum(tetraploid) 164.531
CNS0095605Slightly white alabastrum(tetraploid) 254.607
CNS0095606Slightly white alabastrum(tetraploid) 3108.615
CNS0095607Whole white alabastrum(tetraploid) 144.580
CNS0095608Whole white alabastrum(tetraploid) 243.592
CNS0095609Whole white alabastrum(tetraploid) 3103.375
CNS0095610Silvery flower (tetraploid) 1109.146
CNS0095611Silvery flower (tetraploid) 2132.208
CNS0095612Silvery flower (tetraploid) 3110.519
CNS0095613Golden flower (tetraploid) 151.113
CNS0095614Golden flower (tetraploid) 282.262
CNS0095615Golden flower (tetraploid) 363.704
CRA001975CRR073297Stem 179.590
CRR073298Stem 279.352
CRR073299Stem 383.591
CRR073300Leaf 1100.671
CRR073301Leaf 295.657
CRR073302Leaf 3100.184
CRR073303Juvenile bud 1110.375
CRR073304Juvenile bud 287.465
CRR073305Juvenile bud 3133.336
CRR073306Third green 171.229
CRR073307Third green 246.704
CRR073308Third green 355.323
CRR073309Second white 186.973
CRR073310Second white 266.402
CRR073311Second white 364.164
CRR073312Silver flowering 152.504
CRR073313Silver flowering 261.185
CRR073314Silver flowering 355.292
CRR073315Gold flowering 166.972
CRR073316Gold flowering 284.642
CRR073317Gold flowering 372.122
CRR073318Tawny withering 156.312
CRR073319Tawny withering 244.543
CRR073320Tawny withering 350.549