Detail information of GWHGAAZE014800


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004233490.16.4563E-179PREDICTED: caffeoylshikimate esterase [Solanum lycopersicum]
Swissprottr|Q9C942|CSE_ARATH4E-46Caffeoylshikimate esterase
trEMBLtr|K4B6K2|K4B6K2_SOLLC6E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc02g063160.2.1}
TAIR10AT5G16120.12E-116alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1916104019166802-
GWHAAZE00000004mRNA1916104019166802-
GWHAAZE00000004exon1916665919166802-
GWHAAZE00000004exon1916498719165016-
GWHAAZE00000004exon1916431219164678-
GWHAAZE00000004exon1916360519163735-
GWHAAZE00000004exon1916335319163490-
GWHAAZE00000004exon1916283119162929-
GWHAAZE00000004exon1916104019161249-
GWHAAZE00000004CDS1916665919166802-
GWHAAZE00000004CDS1916498719165016-
GWHAAZE00000004CDS1916431219164678-
GWHAAZE00000004CDS1916360519163735-
GWHAAZE00000004CDS1916335319163490-
GWHAAZE00000004CDS1916283119162929-
GWHAAZE00000004CDS1916104019161249-
Transcript Sequence

Network for GWHGAAZE014800

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12146.9Hydrolase_41303532.70E-53
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01054MGLL Metabolic pathways map01100
Glycerolipid metabolismmap00561
Regulation of lipolysis in adipocytesmap04923
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.111
SRR3591706second leaf7.387
SRR3591707mature leaf4.341
SRR3591708Shoot apex13.640
SRR3591709Stem16.232
SRR3591710White floral bud5.502
SRR3591711White flower12.607
SRR3591712Green floral bud6.443
SRR3591713Yellow flower33.537
SRP173429 SRR8316895Juvenile bud stage 7.802
SRR8316896Juvenile bud stage 13.196
SRR8316897Juvenile bud stage 6.501
SRR8316894Third green stage 3.639
SRR8316900Third green stage 14.537
SRR8316901Third green stage 12.056
SRR8316898Complete white stage 2.930
SRR8316899Complete white stage 5.249
SRR8316903Complete white stage 4.744
SRR8316902Silver flowering stage2.361
SRR8316904Silver flowering stage3.303
SRR8316905Silver flowering stage1.821
SRR8316906Gold flowering stage 8.971
SRR8316907Gold flowering stage 8.923
SRR8316908Gold flowering stage 24.107
SRP132670SRR6706286Control5.501
SRR6706287Light intensity 50%4.386
SRR6706288Light intensity 20%5.246
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.186
CNS0095593Slightly white alabastrum(diploid) 214.374
CNS0095594Slightly white alabastrum(diploid) 325.234
CNS0095595Whole white alabastrum(diploid) 217.188
CNS0095596Whole white alabastrum(diploid) 321.495
CNS0095597Whole white alabastrum(diploid) 418.554
CNS0095598Silvery flower (diploied) 18.888
CNS0095599Silvery flower (diploied) 29.424
CNS0095600Silvery flower (diploied) 313.133
CNS0095601Golden flower (diploid) 111.484
CNS0095602Golden flower (diploid) 226.735
CNS0095603Golden flower (diploid) 326.161
CNS0095604Slightly white alabastrum(tetraploid) 117.321
CNS0095605Slightly white alabastrum(tetraploid) 219.928
CNS0095606Slightly white alabastrum(tetraploid) 37.029
CNS0095607Whole white alabastrum(tetraploid) 119.360
CNS0095608Whole white alabastrum(tetraploid) 218.681
CNS0095609Whole white alabastrum(tetraploid) 310.980
CNS0095610Silvery flower (tetraploid) 124.994
CNS0095611Silvery flower (tetraploid) 221.938
CNS0095612Silvery flower (tetraploid) 317.030
CNS0095613Golden flower (tetraploid) 131.820
CNS0095614Golden flower (tetraploid) 231.882
CNS0095615Golden flower (tetraploid) 323.858
CRA001975CRR073297Stem 115.583
CRR073298Stem 211.673
CRR073299Stem 312.225
CRR073300Leaf 113.847
CRR073301Leaf 213.321
CRR073302Leaf 311.956
CRR073303Juvenile bud 19.610
CRR073304Juvenile bud 27.286
CRR073305Juvenile bud 35.656
CRR073306Third green 12.884
CRR073307Third green 23.002
CRR073308Third green 32.197
CRR073309Second white 18.373
CRR073310Second white 28.990
CRR073311Second white 37.425
CRR073312Silver flowering 111.058
CRR073313Silver flowering 213.434
CRR073314Silver flowering 310.618
CRR073315Gold flowering 111.270
CRR073316Gold flowering 215.895
CRR073317Gold flowering 38.209
CRR073318Tawny withering 117.610
CRR073319Tawny withering 223.449
CRR073320Tawny withering 320.864