Detail information of GWHGAAZE014802


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011099556.12.8934E-143PREDICTED: LOB domain-containing protein 41 [Sesamum indicum]
Swissprottr|Q9M886|LBD41_ARATH1E-107LOB domain-containing protein 41
trEMBLtr|M5WTB8|M5WTB8_PRUPE8E-138Uncharacterized protein {ECO:0000313|EMBL:EMJ16944.1}
TAIR10AT3G02550.14E-80LOB domain-containing protein 41

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1920933419210410+
GWHAAZE00000004mRNA1920933419210410+
GWHAAZE00000004exon1920933419209523+
GWHAAZE00000004exon1920974319210410+
GWHAAZE00000004CDS1920933419209523+
GWHAAZE00000004CDS1920974319210410+
Transcript Sequence

Network for GWHGAAZE014802

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.15LOB41023.00E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf47.952
SRR3591706second leaf1.334
SRR3591707mature leaf0.808
SRR3591708Shoot apex13.792
SRR3591709Stem120.026
SRR3591710White floral bud10.196
SRR3591711White flower19.660
SRR3591712Green floral bud9.270
SRR3591713Yellow flower15.170
SRP173429 SRR8316895Juvenile bud stage 44.024
SRR8316896Juvenile bud stage 98.675
SRR8316897Juvenile bud stage 51.136
SRR8316894Third green stage 5.477
SRR8316900Third green stage 9.044
SRR8316901Third green stage 15.200
SRR8316898Complete white stage 10.006
SRR8316899Complete white stage 6.589
SRR8316903Complete white stage 7.482
SRR8316902Silver flowering stage16.556
SRR8316904Silver flowering stage18.311
SRR8316905Silver flowering stage18.920
SRR8316906Gold flowering stage 18.532
SRR8316907Gold flowering stage 69.751
SRR8316908Gold flowering stage 42.251
SRP132670SRR6706286Control6.486
SRR6706287Light intensity 50%7.709
SRR6706288Light intensity 20%10.328
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.604
CNS0095593Slightly white alabastrum(diploid) 216.362
CNS0095594Slightly white alabastrum(diploid) 315.741
CNS0095595Whole white alabastrum(diploid) 29.781
CNS0095596Whole white alabastrum(diploid) 310.845
CNS0095597Whole white alabastrum(diploid) 412.869
CNS0095598Silvery flower (diploied) 115.363
CNS0095599Silvery flower (diploied) 213.154
CNS0095600Silvery flower (diploied) 315.706
CNS0095601Golden flower (diploid) 128.694
CNS0095602Golden flower (diploid) 244.670
CNS0095603Golden flower (diploid) 345.227
CNS0095604Slightly white alabastrum(tetraploid) 15.710
CNS0095605Slightly white alabastrum(tetraploid) 26.940
CNS0095606Slightly white alabastrum(tetraploid) 35.038
CNS0095607Whole white alabastrum(tetraploid) 14.491
CNS0095608Whole white alabastrum(tetraploid) 24.516
CNS0095609Whole white alabastrum(tetraploid) 37.831
CNS0095610Silvery flower (tetraploid) 13.125
CNS0095611Silvery flower (tetraploid) 28.614
CNS0095612Silvery flower (tetraploid) 314.741
CNS0095613Golden flower (tetraploid) 115.967
CNS0095614Golden flower (tetraploid) 28.495
CNS0095615Golden flower (tetraploid) 312.865
CRA001975CRR073297Stem 177.550
CRR073298Stem 275.375
CRR073299Stem 3100.680
CRR073300Leaf 141.027
CRR073301Leaf 256.454
CRR073302Leaf 376.439
CRR073303Juvenile bud 155.967
CRR073304Juvenile bud 219.336
CRR073305Juvenile bud 360.760
CRR073306Third green 16.314
CRR073307Third green 213.537
CRR073308Third green 323.558
CRR073309Second white 110.102
CRR073310Second white 24.331
CRR073311Second white 33.388
CRR073312Silver flowering 111.639
CRR073313Silver flowering 224.420
CRR073314Silver flowering 322.782
CRR073315Gold flowering 15.273
CRR073316Gold flowering 26.058
CRR073317Gold flowering 310.378
CRR073318Tawny withering 1761.814
CRR073319Tawny withering 2455.772
CRR073320Tawny withering 31167.938