Detail information of GWHGAAZE014817


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP02807.11.5005E-132unnamed protein product [Coffea canephora]
Swissprottr|Q40287|UFOG5_MANES2E-110Anthocyanidin 3-O-glucosyltransferase 5
trEMBLtr|A0A068U3D1|A0A068U3D1_COFCA6E-133Coffea canephora DH200=94 genomic scaffold, scaffold_8 {ECO:0000313|EMBL:CDP02807.1}
TAIR10AT3G50740.18E-77UDP-glucosyl transferase 72E1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1956811819568987-
GWHAAZE00000004mRNA1956811819568987-
GWHAAZE00000004exon1956858119568987-
GWHAAZE00000004exon1956811819568541-
GWHAAZE00000004CDS1956858119568987-
GWHAAZE00000004CDS1956811819568541-
Transcript Sequence

Network for GWHGAAZE014817

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00201.19UDPGT792042.10E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12356UGT72E Phenylpropanoid biosynthesis map00940

Gene Ontology

GO term OntologyName
GO:0016758molecular_functiontransferase activity, transferring hexosyl groups

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE014817.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 3020406080100120140160180200220Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.969
SRR3591706second leaf38.860
SRR3591707mature leaf37.701
SRR3591708Shoot apex8.637
SRR3591709Stem2.644
SRR3591710White floral bud0.129
SRR3591711White flower0.749
SRR3591712Green floral bud0.176
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 3.803
SRR8316896Juvenile bud stage 4.995
SRR8316897Juvenile bud stage 1.558
SRR8316894Third green stage 0.520
SRR8316900Third green stage 0.043
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.386
SRR8316902Silver flowering stage0.064
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.176
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.590
SRR6706287Light intensity 50%0.335
SRR6706288Light intensity 20%0.236
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.428
CNS0095593Slightly white alabastrum(diploid) 20.158
CNS0095594Slightly white alabastrum(diploid) 32.866
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.020
CNS0095597Whole white alabastrum(diploid) 40.566
CNS0095598Silvery flower (diploied) 15.574
CNS0095599Silvery flower (diploied) 22.820
CNS0095600Silvery flower (diploied) 30.452
CNS0095601Golden flower (diploid) 17.982
CNS0095602Golden flower (diploid) 24.868
CNS0095603Golden flower (diploid) 33.444
CNS0095604Slightly white alabastrum(tetraploid) 10.312
CNS0095605Slightly white alabastrum(tetraploid) 20.674
CNS0095606Slightly white alabastrum(tetraploid) 30.339
CNS0095607Whole white alabastrum(tetraploid) 10.172
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.591
CNS0095612Silvery flower (tetraploid) 30.174
CNS0095613Golden flower (tetraploid) 10.779
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.125
CRA001975CRR073297Stem 118.624
CRR073298Stem 28.130
CRR073299Stem 319.005
CRR073300Leaf 10.135
CRR073301Leaf 20.470
CRR073302Leaf 30.772
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.115
CRR073305Juvenile bud 30.037
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.300
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.035
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.461
CRR073315Gold flowering 1134.747
CRR073316Gold flowering 2124.304
CRR073317Gold flowering 3209.201
CRR073318Tawny withering 10.005
CRR073319Tawny withering 20.071
CRR073320Tawny withering 30.409