Detail information of GWHGAAZE014824


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009590475.10PREDICTED: scarecrow-like protein 15 [Nicotiana tomentosiformis]
Swissprottr|O23210|SCL15_ARATH1E-144Scarecrow-like protein 15
trEMBLtr|A9XLD4|A9XLD4_SOLME0Uncharacterized protein {ECO:0000313|EMBL:ABU45178.1}
TAIR10AT4G36710.15E-107GRAS family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1974838519749971-
GWHAAZE00000004mRNA1974838519749971-
GWHAAZE00000004exon1974838519749971-
GWHAAZE00000004CDS1974838519749971-
Transcript Sequence

Network for GWHGAAZE014824

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS1705271.10E-88
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.379
SRR3591706second leaf13.550
SRR3591707mature leaf21.052
SRR3591708Shoot apex5.743
SRR3591709Stem38.622
SRR3591710White floral bud29.403
SRR3591711White flower34.545
SRR3591712Green floral bud21.521
SRR3591713Yellow flower10.987
SRP173429 SRR8316895Juvenile bud stage 1.987
SRR8316896Juvenile bud stage 2.311
SRR8316897Juvenile bud stage 1.091
SRR8316894Third green stage 2.159
SRR8316900Third green stage 6.031
SRR8316901Third green stage 7.418
SRR8316898Complete white stage 6.626
SRR8316899Complete white stage 19.140
SRR8316903Complete white stage 10.445
SRR8316902Silver flowering stage7.757
SRR8316904Silver flowering stage11.084
SRR8316905Silver flowering stage6.353
SRR8316906Gold flowering stage 8.864
SRR8316907Gold flowering stage 10.440
SRR8316908Gold flowering stage 10.721
SRP132670SRR6706286Control11.253
SRR6706287Light intensity 50%10.249
SRR6706288Light intensity 20%10.311
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.266
CNS0095593Slightly white alabastrum(diploid) 213.652
CNS0095594Slightly white alabastrum(diploid) 36.430
CNS0095595Whole white alabastrum(diploid) 29.290
CNS0095596Whole white alabastrum(diploid) 36.207
CNS0095597Whole white alabastrum(diploid) 413.042
CNS0095598Silvery flower (diploied) 19.251
CNS0095599Silvery flower (diploied) 28.643
CNS0095600Silvery flower (diploied) 314.907
CNS0095601Golden flower (diploid) 17.259
CNS0095602Golden flower (diploid) 213.087
CNS0095603Golden flower (diploid) 315.807
CNS0095604Slightly white alabastrum(tetraploid) 16.626
CNS0095605Slightly white alabastrum(tetraploid) 27.201
CNS0095606Slightly white alabastrum(tetraploid) 39.830
CNS0095607Whole white alabastrum(tetraploid) 19.145
CNS0095608Whole white alabastrum(tetraploid) 25.619
CNS0095609Whole white alabastrum(tetraploid) 38.834
CNS0095610Silvery flower (tetraploid) 120.889
CNS0095611Silvery flower (tetraploid) 210.666
CNS0095612Silvery flower (tetraploid) 311.638
CNS0095613Golden flower (tetraploid) 17.820
CNS0095614Golden flower (tetraploid) 210.508
CNS0095615Golden flower (tetraploid) 312.314
CRA001975CRR073297Stem 15.378
CRR073298Stem 25.343
CRR073299Stem 36.253
CRR073300Leaf 115.119
CRR073301Leaf 214.133
CRR073302Leaf 317.328
CRR073303Juvenile bud 128.366
CRR073304Juvenile bud 221.067
CRR073305Juvenile bud 331.191
CRR073306Third green 132.946
CRR073307Third green 246.930
CRR073308Third green 333.503
CRR073309Second white 136.681
CRR073310Second white 222.772
CRR073311Second white 314.432
CRR073312Silver flowering 18.930
CRR073313Silver flowering 213.120
CRR073314Silver flowering 313.951
CRR073315Gold flowering 119.441
CRR073316Gold flowering 214.727
CRR073317Gold flowering 317.845
CRR073318Tawny withering 138.327
CRR073319Tawny withering 250.310
CRR073320Tawny withering 339.249