Detail information of GWHGAAZE014848


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI17508.31.435E-78unnamed protein product [Vitis vinifera]
Swissprottr|Q9ZPW7|ZHD6_ARATH1E-50Zinc-finger homeodomain protein 6
trEMBLtr|A0A061DH37|A0A061DH37_THECC2E-78Homeobox protein 24, putative {ECO:0000313|EMBL:EOX91076.1}
TAIR10AT2G18350.11E-31homeobox protein 24

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2026370420264315+
GWHAAZE00000004mRNA2026370420264315+
GWHAAZE00000004exon2026370420263965+
GWHAAZE00000004exon2026403820264315+
GWHAAZE00000004CDS2026370420263965+
GWHAAZE00000004CDS2026403820264315+
Transcript Sequence

Network for GWHGAAZE014848

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0075


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04770.13ZF-HD_dimer1403.20E-20
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors Familyzf-HD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.902
SRR3591706second leaf1.292
SRR3591707mature leaf0.279
SRR3591708Shoot apex15.037
SRR3591709Stem9.351
SRR3591710White floral bud2.986
SRR3591711White flower6.283
SRR3591712Green floral bud1.039
SRR3591713Yellow flower0.959
SRP173429 SRR8316895Juvenile bud stage 2.775
SRR8316896Juvenile bud stage 3.907
SRR8316897Juvenile bud stage 0.963
SRR8316894Third green stage 1.471
SRR8316900Third green stage 1.019
SRR8316901Third green stage 1.809
SRR8316898Complete white stage 0.108
SRR8316899Complete white stage 3.248
SRR8316903Complete white stage 1.812
SRR8316902Silver flowering stage0.078
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.321
SRR8316907Gold flowering stage 0.589
SRR8316908Gold flowering stage 0.484
SRP132670SRR6706286Control1.087
SRR6706287Light intensity 50%1.131
SRR6706288Light intensity 20%1.299
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.052
CNS0095593Slightly white alabastrum(diploid) 24.007
CNS0095594Slightly white alabastrum(diploid) 32.779
CNS0095595Whole white alabastrum(diploid) 23.429
CNS0095596Whole white alabastrum(diploid) 30.895
CNS0095597Whole white alabastrum(diploid) 43.405
CNS0095598Silvery flower (diploied) 130.101
CNS0095599Silvery flower (diploied) 243.573
CNS0095600Silvery flower (diploied) 35.409
CNS0095601Golden flower (diploid) 127.282
CNS0095602Golden flower (diploid) 211.098
CNS0095603Golden flower (diploid) 312.193
CNS0095604Slightly white alabastrum(tetraploid) 13.610
CNS0095605Slightly white alabastrum(tetraploid) 22.342
CNS0095606Slightly white alabastrum(tetraploid) 34.948
CNS0095607Whole white alabastrum(tetraploid) 13.328
CNS0095608Whole white alabastrum(tetraploid) 20.848
CNS0095609Whole white alabastrum(tetraploid) 30.480
CNS0095610Silvery flower (tetraploid) 10.380
CNS0095611Silvery flower (tetraploid) 21.714
CNS0095612Silvery flower (tetraploid) 31.210
CNS0095613Golden flower (tetraploid) 10.469
CNS0095614Golden flower (tetraploid) 21.116
CNS0095615Golden flower (tetraploid) 30.285
CRA001975CRR073297Stem 13.307
CRR073298Stem 22.676
CRR073299Stem 33.891
CRR073300Leaf 12.078
CRR073301Leaf 22.076
CRR073302Leaf 32.040
CRR073303Juvenile bud 11.762
CRR073304Juvenile bud 21.016
CRR073305Juvenile bud 34.700
CRR073306Third green 10.076
CRR073307Third green 20.040
CRR073308Third green 30.639
CRR073309Second white 10.000
CRR073310Second white 20.252
CRR073311Second white 30.047
CRR073312Silver flowering 10.091
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.638
CRR073316Gold flowering 20.447
CRR073317Gold flowering 31.015
CRR073318Tawny withering 12.812
CRR073319Tawny withering 27.918
CRR073320Tawny withering 32.959