Detail information of GWHGAAZE014862


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009762330.10PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Nicotiana sylvestris]
Swissprottr|Q9FJZ3|MAN7_ARATH0Mannan endo-1,4-beta-mannosidase 7 (Precursor)
trEMBLtr|K4BB13|K4BB13_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc02g084990.2.1}
TAIR10AT5G66460.13E-167Glycosyl hydrolase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2047616920478813+
GWHAAZE00000004mRNA2047616920478813+
GWHAAZE00000004exon2047616920476495+
GWHAAZE00000004exon2047663820476832+
GWHAAZE00000004exon2047700120477123+
GWHAAZE00000004exon2047742620477628+
GWHAAZE00000004exon2047835720478813+
GWHAAZE00000004CDS2047616920476495+
GWHAAZE00000004CDS2047663820476832+
GWHAAZE00000004CDS2047700120477123+
GWHAAZE00000004CDS2047742620477628+
GWHAAZE00000004CDS2047835720478813+
Transcript Sequence

Network for GWHGAAZE014862

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00150.19Cellulase673334.30E-16
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K19355MAN Metabolic pathways map01100
Fructose and mannose metabolismmap00051

Gene Ontology

GO term OntologyName
GO:0005975biological_processcarbohydrate metabolic process
GO:0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE014862.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 3050100150200250300350400450500550600650Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf571.763
SRR3591706second leaf406.140
SRR3591707mature leaf213.400
SRR3591708Shoot apex251.785
SRR3591709Stem122.120
SRR3591710White floral bud151.692
SRR3591711White flower99.221
SRR3591712Green floral bud511.969
SRR3591713Yellow flower14.337
SRP173429 SRR8316895Juvenile bud stage 49.350
SRR8316896Juvenile bud stage 75.146
SRR8316897Juvenile bud stage 34.610
SRR8316894Third green stage 86.716
SRR8316900Third green stage 344.181
SRR8316901Third green stage 253.116
SRR8316898Complete white stage 30.029
SRR8316899Complete white stage 342.816
SRR8316903Complete white stage 51.347
SRR8316902Silver flowering stage18.274
SRR8316904Silver flowering stage22.582
SRR8316905Silver flowering stage12.057
SRR8316906Gold flowering stage 18.644
SRR8316907Gold flowering stage 9.945
SRR8316908Gold flowering stage 13.857
SRP132670SRR6706286Control255.770
SRR6706287Light intensity 50%248.434
SRR6706288Light intensity 20%247.966
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1176.354
CNS0095593Slightly white alabastrum(diploid) 2167.982
CNS0095594Slightly white alabastrum(diploid) 392.245
CNS0095595Whole white alabastrum(diploid) 2162.155
CNS0095596Whole white alabastrum(diploid) 3198.403
CNS0095597Whole white alabastrum(diploid) 4144.666
CNS0095598Silvery flower (diploied) 174.652
CNS0095599Silvery flower (diploied) 249.096
CNS0095600Silvery flower (diploied) 370.627
CNS0095601Golden flower (diploid) 175.048
CNS0095602Golden flower (diploid) 254.087
CNS0095603Golden flower (diploid) 350.921
CNS0095604Slightly white alabastrum(tetraploid) 1220.752
CNS0095605Slightly white alabastrum(tetraploid) 2175.613
CNS0095606Slightly white alabastrum(tetraploid) 3458.341
CNS0095607Whole white alabastrum(tetraploid) 1122.043
CNS0095608Whole white alabastrum(tetraploid) 2111.140
CNS0095609Whole white alabastrum(tetraploid) 3285.018
CNS0095610Silvery flower (tetraploid) 128.840
CNS0095611Silvery flower (tetraploid) 257.847
CNS0095612Silvery flower (tetraploid) 328.535
CNS0095613Golden flower (tetraploid) 11.273
CNS0095614Golden flower (tetraploid) 221.775
CNS0095615Golden flower (tetraploid) 312.934
CRA001975CRR073297Stem 1173.861
CRR073298Stem 2213.665
CRR073299Stem 3180.539
CRR073300Leaf 1421.971
CRR073301Leaf 2334.972
CRR073302Leaf 3334.468
CRR073303Juvenile bud 1551.732
CRR073304Juvenile bud 2244.369
CRR073305Juvenile bud 3440.555
CRR073306Third green 118.524
CRR073307Third green 220.584
CRR073308Third green 332.233
CRR073309Second white 121.046
CRR073310Second white 217.511
CRR073311Second white 36.377
CRR073312Silver flowering 13.788
CRR073313Silver flowering 25.966
CRR073314Silver flowering 36.415
CRR073315Gold flowering 115.278
CRR073316Gold flowering 214.226
CRR073317Gold flowering 332.734
CRR073318Tawny withering 154.474
CRR073319Tawny withering 239.567
CRR073320Tawny withering 378.656