Gene detail

Detail information of GWHGAAZE014872

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009798487.1	0	PREDICTED: abscisic acid 8'-hydroxylase 1-like [Nicotiana sylvestris]
Swissprot	tr\|Q50EK1\|C16B1_PICSI	5E-65	Cytochrome P450 716B1
trEMBL	tr\|M0ZVZ1\|M0ZVZ1_SOLTU	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400009297}
TAIR10	AT1G19630.1	2E-113	cytochrome P450, family 722, subfamily A, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	20670313	20674175	-
GWHAAZE00000004	mRNA	20670313	20674175	-
GWHAAZE00000004	exon	20670313	20670433	-
GWHAAZE00000004	exon	20670526	20670644	-
GWHAAZE00000004	exon	20670748	20670854	-
GWHAAZE00000004	exon	20671076	20671154	-
GWHAAZE00000004	exon	20671279	20671365	-
GWHAAZE00000004	exon	20671481	20671732	-
GWHAAZE00000004	exon	20672398	20672547	-
GWHAAZE00000004	exon	20673074	20673398	-
GWHAAZE00000004	exon	20673940	20674175	-
GWHAAZE00000004	CDS	20673940	20674175	-
GWHAAZE00000004	CDS	20673074	20673398	-
GWHAAZE00000004	CDS	20672398	20672547	-
GWHAAZE00000004	CDS	20671481	20671732	-
GWHAAZE00000004	CDS	20671279	20671365	-
GWHAAZE00000004	CDS	20671076	20671154	-
GWHAAZE00000004	CDS	20670748	20670854	-
GWHAAZE00000004	CDS	20670526	20670644	-
GWHAAZE00000004	CDS	20670313	20670433	-

Transcript Sequence
>GWHTAAZE014886 ATGGTGACTATGTCAAAGGAGGAGCTTCTCTTCTTAGTCAAGAATTACTATGATATTTTCTTGGCTTCACTGCTTTCTATAGGAATAACATTTATTCTATTGAGAAGATGCACAAGCGTGAAGAGTAGTGTCCCCGGCCGGCTCGGGCTACCTTTCGTGGGTGAAACCTTCTCCTTTCTCTCGGCCACTAGTAGCACTAAAGGTTGCTATGATTTTGTTAGACTCCGACGATTATGGTATGGAAAGTGGTTCAAAACAAGAATATTTGGTAGGGTTCATGTGTTTGTTCCAAGTGTCGAGGGTGCAAAGATGATATTTACCAATGATTTCCTGCGGTTCAACAAGGGGTTTGTGAAATCAATGGGGGATGCCGTTGGTCCGAAAAGCTTGCTATGCGTTCCTCATGAGAGTCACAGGAGGATAAGGCGTCTTCTATCGGATCCTTTCTCAATCAATTCTTTGTCGAAGTTTGTTCAGAAATTCGACAAAATGCTGTCTGAAAGGCTGGAGAAATTGGAAAAGGATGGGAACAGCTTTGTGGTGCTTGACTTCAATATGAAGATAGCATTTGATGCAATGTGCGATATGTTGATGAGCATCACAGATGCCACCTTGCTAAAACAAATTGAACGAGATTGTACAGCTGTTTCCAATGCCATGCTATCATTTCCTGTTATGATTCCTGGCACCAGATACTACAAAGGCATCAAGGCACGTAACAGGCTCATGGAAACCTTTGAAGCAATGATTGCCCGCCGCCGGAGTGGAAAAGAATCTCATGTAGACTTCCTGCAGTCCATGTTACAGAGAGATTCATATCCAGCTAATGAAAAGCTCGACGACTCAGAGATTATGGATAACCTATTGACACTGATAGTTGCAGGGCAGACAACCACCGCAGCTGCACTGATGTGGAGCGTCAAGTTCTTGGATGAAAACAGGGCAGTTCAAGACAGACTGAGGGAAGAGACATTGGCAATACTCGGAAAGAAGACAGATAGAGCCTTACTTACCCTTGAAGATCTGAACAACATGTCATACGGCTCCAAGGTTGTGAAGGAGACACTGAGAATGTCGAATGTCTTATTGTGGTTTCCTCGCATTGCACTTGATGACTGCATAATTGATGGTTTTGAAATTAAAAGAGGATGGAATGTTAACATTGATGCAACTTGTATACATTACGACCCAGCATTATACAAGGATCCTATGCAATTCAACCCTTCAAGATTTGATGAAATCCAGAAGCCATACACATACATACCATTTGGATCGGGACCTAGGACATGCTTAGGGATTAATATGGCAAGGGTGACAATGTTGGTGTTCTTACACCGACTAACCAGCGGGTACAAGTGGAAGGTCGATGATCTAGATACTTGCCTAGAAAGGAAAGCGCATATTCCTAGACTGAGGAGCGGATGCCCAATAACCTTAACGGCCTTAAACAATGGAAAACATACGGAGTCAAGCTGA

Network for GWHGAAZE014872

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	46	459	3.10E-66

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.634
	SRR3591706	second leaf	9.148
	SRR3591707	mature leaf	5.716
	SRR3591708	Shoot apex	0.578
	SRR3591709	Stem	0.215
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.018
	SRR3591712	Green floral bud	0.111
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.019
	SRR8316897	Juvenile bud stage	0.099
	SRR8316894	Third green stage	0.031
	SRR8316900	Third green stage	0.067
	SRR8316901	Third green stage	0.062
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.042
	SRR8316903	Complete white stage	0.019
	SRR8316902	Silver flowering stage	0.109
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.035
	SRR8316906	Gold flowering stage	0.058
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.008
	SRR6706287	Light intensity 50%	0.078
	SRR6706288	Light intensity 20%	0.012
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.135
	CNS0095593	Slightly white alabastrum(diploid) 2	0.041
	CNS0095594	Slightly white alabastrum(diploid) 3	0.203
	CNS0095595	Whole white alabastrum(diploid) 2	0.107
	CNS0095596	Whole white alabastrum(diploid) 3	0.080
	CNS0095597	Whole white alabastrum(diploid) 4	0.041
	CNS0095598	Silvery flower (diploied) 1	0.056
	CNS0095599	Silvery flower (diploied) 2	0.076
	CNS0095600	Silvery flower (diploied) 3	0.261
	CNS0095601	Golden flower (diploid) 1	0.064
	CNS0095602	Golden flower (diploid) 2	0.026
	CNS0095603	Golden flower (diploid) 3	0.129
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.030
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.140
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.062
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.047
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.016
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.147
	CNS0095610	Silvery flower (tetraploid) 1	0.018
	CNS0095611	Silvery flower (tetraploid) 2	0.027
	CNS0095612	Silvery flower (tetraploid) 3	0.227
	CNS0095613	Golden flower (tetraploid) 1	0.066
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.027
CRA001975	CRR073297	Stem 1	0.223
	CRR073298	Stem 2	0.023
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.077
	CRR073301	Leaf 2	0.101
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.004
	CRR073304	Juvenile bud 2	0.061
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.002
	CRR073311	Second white 3	0.002
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.037
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.023
	CRR073316	Gold flowering 2	0.155
	CRR073317	Gold flowering 3	0.053
	CRR073318	Tawny withering 1	0.083
	CRR073319	Tawny withering 2	0.648
	CRR073320	Tawny withering 3	0.113