Gene detail

Detail information of GWHGAAZE014900

Functional Annotation

Database	Orthologs	Annotation
Nr	KDO71056.1	hypothetical protein CISIN_1g046207mg [Citrus sinensis]
Swissprot	tr\|O23244\|PPA25_ARATH	Purple acid phosphatase 25 (Precursor)
trEMBL	tr\|A0A067G6I3\|A0A067G6I3_CITSI	Purple acid phosphatase {ECO:0000256\|RuleBase:RU361203}
TAIR10	AT4G36350.1	purple acid phosphatase 25

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	21171185	21175903	+
GWHAAZE00000004	mRNA	21171185	21175903	+
GWHAAZE00000004	exon	21171185	21171367	+
GWHAAZE00000004	exon	21172769	21172993	+
GWHAAZE00000004	exon	21173117	21173228	+
GWHAAZE00000004	exon	21174586	21174812	+
GWHAAZE00000004	exon	21174897	21175035	+
GWHAAZE00000004	exon	21175143	21175363	+
GWHAAZE00000004	exon	21175459	21175580	+
GWHAAZE00000004	exon	21175705	21175903	+
GWHAAZE00000004	CDS	21171185	21171367	+
GWHAAZE00000004	CDS	21172769	21172993	+
GWHAAZE00000004	CDS	21173117	21173228	+
GWHAAZE00000004	CDS	21174586	21174812	+
GWHAAZE00000004	CDS	21174897	21175035	+
GWHAAZE00000004	CDS	21175143	21175363	+
GWHAAZE00000004	CDS	21175459	21175580	+
GWHAAZE00000004	CDS	21175705	21175903	+

Transcript Sequence
>GWHTAAZE014914 TTCCCGTCCATAGGTATCGCAATGCGGGGGGTCTTACTTGTCTCAGTACTTTCATTGCTACTACACATTACAGGGTTGTGCAATGCAGGTTTAACAAGTAGTTTCGTACGAAAAACTCAAGCTTCCGTTGACATGCCTGTTAAATTATTCTCTCCGCCTCCCGGCTACAATGCCCCCGAACAGGTTCATATAACACAAGGAGATCTTGATGGGCGGGGAGTGATAATTTCTTGGGTGACGCCGCTAAAGCGACACCCCAGTACAGTGGCTATTTGGGAAGCACATTCACATTCCCAGAACAATCACAATCACAATCACAGGAAAATCATTCATGCTAAAACCACATCTTATGAGTACTACAACTATACTTCCGGCTATATTCATCATGCCACCGTTAAAAACTTGAAGTACAACACTAAGTACATCTACGAACTCGGGAAGGGCGATGCTCAGCGAAGATTCTTCTTTACAACTCCTCCTGAAGTAGGACCCGACACTCCCTACACATTTGGCATTATTGGTGATTTGGGACAAACTTATGACTCCAATCAGACATTTCATCATTACCATTCGAACCCAAAAGGTCAAGCTGTTTTGTTTGCAGGCGATCTTTCATACGCGGACAATCACCCCTTCCACGACAATGTGAGATGGGATACATGGGGAAGGTTCATCGAGAAGAACGCTGCTTATCAGGCATGGATATTTGCCCCGGGCAATCATGAACTCGACTACGCACCTGAGATTGGAGAATATGTGCCTTTCAAGCCATACAAGCACCGATACCATGTACCCTACAGGGCATCCAATAGTACATCCCCTCTTTGGTATTCCATTAAGCGTGCATCTGCACATATCATTGTACTTTCTTCTTACTCAGCTTATGGAAAATATACGCCCCAGTACAGTTGGTTAGAAGAAGAACTCCCTAAGGTTAACAGATCCAAGACCCCATGGCTAATTGTTGTGCTTCACTGTCCGTGGTACAACAGTAATAACTACCATTACATGGAGGGAGAAAGCATGAGAGTCGAGTTTGAACCCTGGTTTGTTCAGCACAAAGTTGATCTTGTGCTTTCTGGTCATGTTCATTCCTATGAGCGCTCAGAGCGAGTATCGAATGTTAGGTATAACATAACAAATGGAGAGAGCATACCAGTCAGGGATCCTCGTGCTCCAGTATACATAACCATAGGTGATGGTGGAAATATTGAAGGCCTTGCAAATGATTTTATGGATCCGCAGCCCAGTTACACAGCATACCGTGAAGCAAGCTTTGGGCATGCGATGCTCGAGATAAAGAACCGGACGCACGCGTATTACACTTGGCACCGTAACCAAGACAATGAAGCTGTTGCTTCGGATTCTATCTGGTTTTATAATAGGTACTGGTATCCGGAGGAAGAGCATAGCTCTCATAGGGTATGA

Network for GWHGAAZE014900

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0181

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF16656.6	Pur_ac_phosph_N	59	158	8.10E-16
PF00149.29	Metallophos	169	366	3.80E-25
PF14008.7	Metallophos_C	392	450	5.60E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003993	molecular_function	acid phosphatase activity
GO:0046872	molecular_function	metal ion binding
GO:0016787	molecular_function	hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.951
	SRR3591706	second leaf	0.086
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.116
	SRR3591709	Stem	0.434
	SRR3591710	White floral bud	0.525
	SRR3591711	White flower	0.304
	SRR3591712	Green floral bud	0.340
	SRR3591713	Yellow flower	0.070
SRP173429	SRR8316895	Juvenile bud stage	45.143
	SRR8316896	Juvenile bud stage	46.544
	SRR8316897	Juvenile bud stage	24.912
	SRR8316894	Third green stage	3.324
	SRR8316900	Third green stage	2.002
	SRR8316901	Third green stage	6.724
	SRR8316898	Complete white stage	0.324
	SRR8316899	Complete white stage	12.917
	SRR8316903	Complete white stage	0.509
	SRR8316902	Silver flowering stage	0.513
	SRR8316904	Silver flowering stage	0.345
	SRR8316905	Silver flowering stage	0.284
	SRR8316906	Gold flowering stage	1.001
	SRR8316907	Gold flowering stage	0.544
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.434
	SRR6706287	Light intensity 50%	0.435
	SRR6706288	Light intensity 20%	0.333
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	13.244
	CNS0095593	Slightly white alabastrum(diploid) 2	10.433
	CNS0095594	Slightly white alabastrum(diploid) 3	23.521
	CNS0095595	Whole white alabastrum(diploid) 2	8.437
	CNS0095596	Whole white alabastrum(diploid) 3	1.231
	CNS0095597	Whole white alabastrum(diploid) 4	5.748
	CNS0095598	Silvery flower (diploied) 1	22.494
	CNS0095599	Silvery flower (diploied) 2	45.529
	CNS0095600	Silvery flower (diploied) 3	9.946
	CNS0095601	Golden flower (diploid) 1	17.504
	CNS0095602	Golden flower (diploid) 2	15.424
	CNS0095603	Golden flower (diploid) 3	13.772
	CNS0095604	Slightly white alabastrum(tetraploid) 1	7.809
	CNS0095605	Slightly white alabastrum(tetraploid) 2	8.031
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.530
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.875
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.151
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.001
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.077
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	19.801
	CRR073298	Stem 2	10.809
	CRR073299	Stem 3	17.500
	CRR073300	Leaf 1	2.830
	CRR073301	Leaf 2	4.667
	CRR073302	Leaf 3	2.026
	CRR073303	Juvenile bud 1	1.397
	CRR073304	Juvenile bud 2	1.025
	CRR073305	Juvenile bud 3	1.599
	CRR073306	Third green 1	0.297
	CRR073307	Third green 2	0.227
	CRR073308	Third green 3	0.102
	CRR073309	Second white 1	0.172
	CRR073310	Second white 2	0.175
	CRR073311	Second white 3	0.186
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.427
	CRR073314	Silver flowering 3	0.028
	CRR073315	Gold flowering 1	1.229
	CRR073316	Gold flowering 2	5.435
	CRR073317	Gold flowering 3	1.709
	CRR073318	Tawny withering 1	1.575
	CRR073319	Tawny withering 2	9.086
	CRR073320	Tawny withering 3	0.582