Detail information of GWHGAAZE015096


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010270800.10PREDICTED: beta-catenin-like protein 1 [Nelumbo nucifera]
trEMBLtr|F6I762|F6I762_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB62780.1}
TAIR10AT3G02710.18E-179ARM repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2504033725045691-
GWHAAZE00000004mRNA2504033725045691-
GWHAAZE00000004exon2504456325045691-
GWHAAZE00000004exon2504218225042278-
GWHAAZE00000004exon2504200525042068-
GWHAAZE00000004exon2504186425041920-
GWHAAZE00000004exon2504165225041689-
GWHAAZE00000004exon2504147625041557-
GWHAAZE00000004exon2504033725040426-
GWHAAZE00000004CDS2504456325045691-
GWHAAZE00000004CDS2504218225042278-
GWHAAZE00000004CDS2504200525042068-
GWHAAZE00000004CDS2504186425041920-
GWHAAZE00000004CDS2504165225041689-
GWHAAZE00000004CDS2504147625041557-
GWHAAZE00000004CDS2504033725040426-
Transcript Sequence

Network for GWHGAAZE015096

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08216.12CTNNBL551532.20E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12864CTNNBL1 Spliceosome map03040

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.431
SRR3591706second leaf17.938
SRR3591707mature leaf15.918
SRR3591708Shoot apex32.870
SRR3591709Stem26.329
SRR3591710White floral bud26.677
SRR3591711White flower35.733
SRR3591712Green floral bud28.150
SRR3591713Yellow flower30.531
SRP173429 SRR8316895Juvenile bud stage 22.226
SRR8316896Juvenile bud stage 27.261
SRR8316897Juvenile bud stage 12.678
SRR8316894Third green stage 11.467
SRR8316900Third green stage 34.847
SRR8316901Third green stage 31.716
SRR8316898Complete white stage 11.632
SRR8316899Complete white stage 33.099
SRR8316903Complete white stage 22.712
SRR8316902Silver flowering stage16.707
SRR8316904Silver flowering stage25.110
SRR8316905Silver flowering stage11.958
SRR8316906Gold flowering stage 33.230
SRR8316907Gold flowering stage 32.574
SRR8316908Gold flowering stage 33.336
SRP132670SRR6706286Control46.627
SRR6706287Light intensity 50%42.468
SRR6706288Light intensity 20%44.591
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.396
CNS0095593Slightly white alabastrum(diploid) 221.251
CNS0095594Slightly white alabastrum(diploid) 322.257
CNS0095595Whole white alabastrum(diploid) 221.712
CNS0095596Whole white alabastrum(diploid) 318.272
CNS0095597Whole white alabastrum(diploid) 421.695
CNS0095598Silvery flower (diploied) 123.703
CNS0095599Silvery flower (diploied) 221.167
CNS0095600Silvery flower (diploied) 329.523
CNS0095601Golden flower (diploid) 120.510
CNS0095602Golden flower (diploid) 228.263
CNS0095603Golden flower (diploid) 324.963
CNS0095604Slightly white alabastrum(tetraploid) 121.932
CNS0095605Slightly white alabastrum(tetraploid) 221.129
CNS0095606Slightly white alabastrum(tetraploid) 338.425
CNS0095607Whole white alabastrum(tetraploid) 114.353
CNS0095608Whole white alabastrum(tetraploid) 217.044
CNS0095609Whole white alabastrum(tetraploid) 332.473
CNS0095610Silvery flower (tetraploid) 134.401
CNS0095611Silvery flower (tetraploid) 230.967
CNS0095612Silvery flower (tetraploid) 327.879
CNS0095613Golden flower (tetraploid) 118.071
CNS0095614Golden flower (tetraploid) 230.667
CNS0095615Golden flower (tetraploid) 324.992
CRA001975CRR073297Stem 125.785
CRR073298Stem 224.406
CRR073299Stem 320.336
CRR073300Leaf 123.486
CRR073301Leaf 223.675
CRR073302Leaf 322.002
CRR073303Juvenile bud 120.064
CRR073304Juvenile bud 215.526
CRR073305Juvenile bud 324.900
CRR073306Third green 18.790
CRR073307Third green 26.542
CRR073308Third green 310.623
CRR073309Second white 17.752
CRR073310Second white 212.412
CRR073311Second white 311.630
CRR073312Silver flowering 17.891
CRR073313Silver flowering 26.478
CRR073314Silver flowering 38.989
CRR073315Gold flowering 17.751
CRR073316Gold flowering 213.232
CRR073317Gold flowering 35.979
CRR073318Tawny withering 120.730
CRR073319Tawny withering 215.044
CRR073320Tawny withering 323.251