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Detail information of GWHGAAZE015160
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002266267.1
0
PREDICTED: DELLA protein GAI-like [Vitis vinifera]
Swissprot
tr|Q7Y1B6|GAI_SOLLC
0
DELLA protein GAI
trEMBL
tr|F6HSI0|F6HSI0_VITVI
0
Putative uncharacterized protein {ECO:0000313|EMBL:CCB57620.1}
TAIR10
AT1G14920.1
0
GRAS family transcription factor family protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000004
gene
26489375
26491009
-
GWHAAZE00000004
mRNA
26489375
26491009
-
GWHAAZE00000004
exon
26490821
26491009
-
GWHAAZE00000004
exon
26490634
26490748
-
GWHAAZE00000004
exon
26489375
26490600
-
GWHAAZE00000004
CDS
26490821
26491009
-
GWHAAZE00000004
CDS
26490634
26490748
-
GWHAAZE00000004
CDS
26489375
26490600
-
Transcript Sequence
>GWHTAAZE015176 ATGGACGAGCTTTTAGCGGTTCTAGGTTATAAAGTCCGTGCATCGGAGATGGCTGACGTCGCGCAAAAGCTCGAGCAACTCGAGATGGCTATGGGAACAACTATGGAGGATGGAATTAATCATCTATCTACCGATACGGTTCATTATAATCCTTCAGATGTATTCGGTTGGGTTCAAAACATGCTCACCGATCCAATAATATTTACCGACGACTCTGTATACGACTTGAGAGCTATTCCCGGCGGTGCTATTTATAATACAGATTCAACGAGCGAGGGAAATAAAAGGAGCAAGCTCAAATCATCTGGATTTGGTACCGATACTGTATCCTTACCGATGGAGGTCGGTATGGTGTCGCCGCCGGTTGCGGCGGAGCCACCGCGGCCTGTGATGGTGGATTCGCAGGAGACAGGAATCCGTCTCGTGCATACGCTTATGGCGTGCGCCGACGCGGTTCAGCAAGATAACCTGAAACTCGCCGATGCCTTGGTAAAGCACATAGTTTATCTTGCGGTCTCCCAGGCCGGAGCTATGAGGAAAGTGGCTACGTACTTTGCGGAAGCTTTAGCTAGAAGAATTTACAAGATCTATCCACAGGATTCGTTAGAACCTTCATACTCAGATGTTCTACAGATGCATTTCTACGAGACTTGTCCGTATCTCAAATTTGCTCATTTCACGGCTAATCAAGCGATTCTGGAAGCATTTGCAGGTGCTAGTAGGGTTCATGTGATTGATTTCAGCTTGAAGCAAGGTATGCAGTGGCCGGCGCTGATGCAAGCCCTGGCGCTGAGGCCGGGAGGTCCACCGGCGTTCCGATTAACAGGAATCGGGCCGCCGCAGCCGGATAATACAGACACGCTGCAGCAGGTTGGATGGAAACTTGCACAGTTGGCCGAAACTATAGGAGTCGAGTTTGAGTTCCGAGGGTTTGTAGCCAACTCGCTGGCGGATCTCGACGCGTCTATGCTAGAGATTCGTCCGAGCGAGGTTGAAGCAGTGGCGGTGAACTCGGTATTTGAACTCCACCGCCTGCTAGCTAGACCTGGCGCGATCGAGAAAGTACTTTCCTCAATCAAGGCTATGAAGCCAAAAATTGTAACAGTCGTTGAAATCGAGTCGGACCACAACGGGGTGGTGTTTTTAGACAGGTTTAACGAGGCTTTGCATTACTACTCGACTATGTTCGACTCGTTGGAGAGTACCGGGTTGACTCAGTTTAACCACCAGGACTTGGTTATGTCCGAGGTTTATCTTGGAAGGCAGATTTACAATGTGGTGGCTTGTGAAGGGGTTGACAGAGTTGAACGGCACGAGACTTTGACTCAGTGGCGGACCCGTTTGAGTTCCGCCGGTTTTGACTCAGTTCACCTCGGGTCAAAAGCGTTTAAGCAAGCGAGTATGCTTTTGGATCTGTTTGCGGGTGGGGACGGGTACCGGGTGGAGGAGACCGACGGGTGTTTGATGCTGGGTTGGCATATGCGTCCACTAATCACCACCTCAGCGTACCAACTCGGTGCTGAAGAGTGA
Network for GWHGAAZE015160
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF12041.9
DELLA
2
64
1.70E-32
PF03514.15
GRAS
141
503
1.10E-133
Protein Sequence
>GWHPAAZE015168 MDELLAVLGYKVRASEMADVAQKLEQLEMAMGTTMEDGINHLSTDTVHYNPSDVFGWVQNMLTDPIIFTDDSVYDLRAIPGGAIYNTDSTSEGNKRSKLKSSGFGTDTVSLPMEVGMVSPPVAAEPPRPVMVDSQETGIRLVHTLMACADAVQQDNLKLADALVKHIVYLAVSQAGAMRKVATYFAEALARRIYKIYPQDSLEPSYSDVLQMHFYETCPYLKFAHFTANQAILEAFAGASRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDTLQQVGWKLAQLAETIGVEFEFRGFVANSLADLDASMLEIRPSEVEAVAVNSVFELHRLLARPGAIEKVLSSIKAMKPKIVTVVEIESDHNGVVFLDRFNEALHYYSTMFDSLESTGLTQFNHQDLVMSEVYLGRQIYNVVACEGVDRVERHETLTQWRTRLSSAGFDSVHLGSKAFKQASMLLDLFAGGDGYRVEETDGCLMLGWHMRPLITTSAYQLGAEE
Gene family
Gene family
subfamily
Transcription Factors Family
GRAS
KEGG pathway
KO
Enzyme
pathway
mapID
K14494
DELLA
Plant hormone signal transduction
map04075
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
37.036
SRR3591706
second leaf
46.582
SRR3591707
mature leaf
56.365
SRR3591708
Shoot apex
49.929
SRR3591709
Stem
32.579
SRR3591710
White floral bud
23.649
SRR3591711
White flower
10.667
SRR3591712
Green floral bud
40.817
SRR3591713
Yellow flower
3.930
SRP173429
SRR8316895
Juvenile bud stage
11.582
SRR8316896
Juvenile bud stage
15.438
SRR8316897
Juvenile bud stage
3.502
SRR8316894
Third green stage
10.063
SRR8316900
Third green stage
28.415
SRR8316901
Third green stage
24.694
SRR8316898
Complete white stage
15.449
SRR8316899
Complete white stage
61.581
SRR8316903
Complete white stage
22.372
SRR8316902
Silver flowering stage
3.236
SRR8316904
Silver flowering stage
4.194
SRR8316905
Silver flowering stage
2.625
SRR8316906
Gold flowering stage
6.794
SRR8316907
Gold flowering stage
7.180
SRR8316908
Gold flowering stage
4.135
SRP132670
SRR6706286
Control
40.113
SRR6706287
Light intensity 50%
41.587
SRR6706288
Light intensity 20%
43.902
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
21.786
CNS0095593
Slightly white alabastrum(diploid) 2
24.039
CNS0095594
Slightly white alabastrum(diploid) 3
14.587
CNS0095595
Whole white alabastrum(diploid) 2
17.114
CNS0095596
Whole white alabastrum(diploid) 3
18.704
CNS0095597
Whole white alabastrum(diploid) 4
15.958
CNS0095598
Silvery flower (diploied) 1
10.472
CNS0095599
Silvery flower (diploied) 2
7.265
CNS0095600
Silvery flower (diploied) 3
10.124
CNS0095601
Golden flower (diploid) 1
6.248
CNS0095602
Golden flower (diploid) 2
11.452
CNS0095603
Golden flower (diploid) 3
9.841
CNS0095604
Slightly white alabastrum(tetraploid) 1
26.770
CNS0095605
Slightly white alabastrum(tetraploid) 2
18.645
CNS0095606
Slightly white alabastrum(tetraploid) 3
70.238
CNS0095607
Whole white alabastrum(tetraploid) 1
14.380
CNS0095608
Whole white alabastrum(tetraploid) 2
8.737
CNS0095609
Whole white alabastrum(tetraploid) 3
28.313
CNS0095610
Silvery flower (tetraploid) 1
8.048
CNS0095611
Silvery flower (tetraploid) 2
9.348
CNS0095612
Silvery flower (tetraploid) 3
9.600
CNS0095613
Golden flower (tetraploid) 1
2.383
CNS0095614
Golden flower (tetraploid) 2
6.319
CNS0095615
Golden flower (tetraploid) 3
2.212
CRA001975
CRR073297
Stem 1
130.329
CRR073298
Stem 2
121.121
CRR073299
Stem 3
177.623
CRR073300
Leaf 1
127.240
CRR073301
Leaf 2
117.455
CRR073302
Leaf 3
144.620
CRR073303
Juvenile bud 1
162.508
CRR073304
Juvenile bud 2
97.531
CRR073305
Juvenile bud 3
190.016
CRR073306
Third green 1
66.836
CRR073307
Third green 2
72.117
CRR073308
Third green 3
67.527
CRR073309
Second white 1
23.439
CRR073310
Second white 2
11.456
CRR073311
Second white 3
16.980
CRR073312
Silver flowering 1
6.174
CRR073313
Silver flowering 2
9.084
CRR073314
Silver flowering 3
7.430
CRR073315
Gold flowering 1
90.055
CRR073316
Gold flowering 2
98.201
CRR073317
Gold flowering 3
161.122
CRR073318
Tawny withering 1
94.844
CRR073319
Tawny withering 2
37.736
CRR073320
Tawny withering 3
110.051