Detail information of GWHGAAZE015184


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG22175.19.46567E-87hypothetical protein F383_07505 [Gossypium arboreum]
Swissprottr|Q6YXH5|ZHD1_ORYSJ5E-76Zinc-finger homeodomain protein 1
trEMBLtr|A0A067FAZ1|A0A067FAZ1_CITSI6E-85Uncharacterized protein {ECO:0000313|EMBL:KDO60627.1}
TAIR10AT4G24660.11E-45homeobox protein 22

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2721325427214010-
GWHAAZE00000004mRNA2721325427214010-
GWHAAZE00000004exon2721325427213633-
GWHAAZE00000004exon2721371027214010-
GWHAAZE00000004CDS2721371027214010-
GWHAAZE00000004CDS2721325427213633-
Transcript Sequence

Network for GWHGAAZE015184

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04770.13ZF-HD_dimer35868.20E-28
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors Familyzf-HD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.265
SRR3591706second leaf5.093
SRR3591707mature leaf0.000
SRR3591708Shoot apex90.004
SRR3591709Stem0.000
SRR3591710White floral bud1.414
SRR3591711White flower0.696
SRR3591712Green floral bud0.165
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 5.595
SRR8316896Juvenile bud stage 2.093
SRR8316897Juvenile bud stage 1.077
SRR8316894Third green stage 0.508
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.052
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 1.096
SRR8316903Complete white stage 0.075
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.303
SRR6706287Light intensity 50%0.109
SRR6706288Light intensity 20%0.095
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.775
CNS0095593Slightly white alabastrum(diploid) 22.716
CNS0095594Slightly white alabastrum(diploid) 33.803
CNS0095595Whole white alabastrum(diploid) 21.598
CNS0095596Whole white alabastrum(diploid) 30.042
CNS0095597Whole white alabastrum(diploid) 40.819
CNS0095598Silvery flower (diploied) 119.480
CNS0095599Silvery flower (diploied) 28.975
CNS0095600Silvery flower (diploied) 32.630
CNS0095601Golden flower (diploid) 18.561
CNS0095602Golden flower (diploid) 26.883
CNS0095603Golden flower (diploid) 37.407
CNS0095604Slightly white alabastrum(tetraploid) 12.844
CNS0095605Slightly white alabastrum(tetraploid) 21.298
CNS0095606Slightly white alabastrum(tetraploid) 34.764
CNS0095607Whole white alabastrum(tetraploid) 10.906
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.063
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 21.564
CNS0095612Silvery flower (tetraploid) 30.226
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 118.138
CRR073298Stem 211.649
CRR073299Stem 328.505
CRR073300Leaf 10.180
CRR073301Leaf 21.690
CRR073302Leaf 30.353
CRR073303Juvenile bud 10.398
CRR073304Juvenile bud 20.082
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.063
CRR073309Second white 10.000
CRR073310Second white 20.094
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.433
CRR073316Gold flowering 20.154
CRR073317Gold flowering 30.452
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.806
CRR073320Tawny withering 30.000