Detail information of GWHGAAZE015307


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011093686.10PREDICTED: protein arginine N-methyltransferase 1.1 [Sesamum indicum]
Swissprottr|Q9SU94|ANM11_ARATH0Protein arginine N-methyltransferase 1.1
trEMBLtr|K4DBW4|K4DBW4_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc12g008760.1.1}
TAIR10AT4G29510.12E-169arginine methyltransferase 11

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene3100749231015334-
GWHAAZE00000004mRNA3100749231015334-
GWHAAZE00000004exon3101511231015334-
GWHAAZE00000004exon3101296731013154-
GWHAAZE00000004exon3101189331011956-
GWHAAZE00000004exon3101142531011567-
GWHAAZE00000004exon3101097731011064-
GWHAAZE00000004exon3100856631008681-
GWHAAZE00000004exon3100809931008249-
GWHAAZE00000004exon3100749231007697-
GWHAAZE00000004CDS3101511231015334-
GWHAAZE00000004CDS3101296731013154-
GWHAAZE00000004CDS3101189331011956-
GWHAAZE00000004CDS3101142531011567-
GWHAAZE00000004CDS3101097731011064-
GWHAAZE00000004CDS3100856631008681-
GWHAAZE00000004CDS3100809931008249-
GWHAAZE00000004CDS3100749231007697-
Transcript Sequence

Network for GWHGAAZE015307

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06325.14PrmA1081821.90E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11434PRMT1 FoxO signaling pathway map04068
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0006479biological_processprotein methylation
GO:0008168molecular_functionmethyltransferase activity

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE015307.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30510152025303540455055606570Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf45.976
SRR3591706second leaf18.448
SRR3591707mature leaf14.693
SRR3591708Shoot apex50.423
SRR3591709Stem37.107
SRR3591710White floral bud34.255
SRR3591711White flower53.603
SRR3591712Green floral bud58.721
SRR3591713Yellow flower36.510
SRP173429 SRR8316895Juvenile bud stage 31.841
SRR8316896Juvenile bud stage 42.201
SRR8316897Juvenile bud stage 17.530
SRR8316894Third green stage 19.267
SRR8316900Third green stage 58.728
SRR8316901Third green stage 46.764
SRR8316898Complete white stage 16.858
SRR8316899Complete white stage 63.147
SRR8316903Complete white stage 21.693
SRR8316902Silver flowering stage20.985
SRR8316904Silver flowering stage26.804
SRR8316905Silver flowering stage12.148
SRR8316906Gold flowering stage 35.888
SRR8316907Gold flowering stage 35.985
SRR8316908Gold flowering stage 45.023
SRP132670SRR6706286Control33.396
SRR6706287Light intensity 50%38.013
SRR6706288Light intensity 20%42.517
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.801
CNS0095593Slightly white alabastrum(diploid) 235.224
CNS0095594Slightly white alabastrum(diploid) 324.718
CNS0095595Whole white alabastrum(diploid) 223.627
CNS0095596Whole white alabastrum(diploid) 326.664
CNS0095597Whole white alabastrum(diploid) 421.350
CNS0095598Silvery flower (diploied) 120.552
CNS0095599Silvery flower (diploied) 218.248
CNS0095600Silvery flower (diploied) 327.915
CNS0095601Golden flower (diploid) 117.261
CNS0095602Golden flower (diploid) 224.314
CNS0095603Golden flower (diploid) 322.924
CNS0095604Slightly white alabastrum(tetraploid) 128.895
CNS0095605Slightly white alabastrum(tetraploid) 221.648
CNS0095606Slightly white alabastrum(tetraploid) 349.968
CNS0095607Whole white alabastrum(tetraploid) 111.034
CNS0095608Whole white alabastrum(tetraploid) 210.554
CNS0095609Whole white alabastrum(tetraploid) 332.214
CNS0095610Silvery flower (tetraploid) 135.493
CNS0095611Silvery flower (tetraploid) 229.784
CNS0095612Silvery flower (tetraploid) 324.176
CNS0095613Golden flower (tetraploid) 112.564
CNS0095614Golden flower (tetraploid) 219.190
CNS0095615Golden flower (tetraploid) 317.602
CRA001975CRR073297Stem 136.454
CRR073298Stem 230.941
CRR073299Stem 334.164
CRR073300Leaf 136.383
CRR073301Leaf 231.887
CRR073302Leaf 336.653
CRR073303Juvenile bud 134.901
CRR073304Juvenile bud 228.575
CRR073305Juvenile bud 336.007
CRR073306Third green 17.107
CRR073307Third green 29.703
CRR073308Third green 39.347
CRR073309Second white 119.949
CRR073310Second white 219.814
CRR073311Second white 315.311
CRR073312Silver flowering 113.770
CRR073313Silver flowering 29.252
CRR073314Silver flowering 35.134
CRR073315Gold flowering 116.011
CRR073316Gold flowering 218.137
CRR073317Gold flowering 313.521
CRR073318Tawny withering 130.088
CRR073319Tawny withering 232.435
CRR073320Tawny withering 341.945