Detail information of GWHGAAZE015431


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP46516.10hypothetical protein JCGZ_08488 [Jatropha curcas]
Swissprottr|Q710E8|ORC1A_ARATH6E-31Origin of replication complex subunit 1A {ECO:0000303|PubMed:16179646}
trEMBLtr|A0A067LDE9|A0A067LDE9_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP46516.1}
TAIR10AT1G07270.16E-132Cell division control, Cdc6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene3946270439467847-
GWHAAZE00000004mRNA3946270439467847-
GWHAAZE00000004exon3946270439462811-
GWHAAZE00000004exon3946346339463558-
GWHAAZE00000004exon3946364139463687-
GWHAAZE00000004exon3946387839463974-
GWHAAZE00000004exon3946422039464352-
GWHAAZE00000004exon3946453039464579-
GWHAAZE00000004exon3946473139464781-
GWHAAZE00000004exon3946517639465249-
GWHAAZE00000004exon3946578539465844-
GWHAAZE00000004exon3946597439466080-
GWHAAZE00000004exon3946626539466374-
GWHAAZE00000004exon3946646239466536-
GWHAAZE00000004exon3946762939467847-
GWHAAZE00000004CDS3946762939467847-
GWHAAZE00000004CDS3946646239466536-
GWHAAZE00000004CDS3946626539466374-
GWHAAZE00000004CDS3946597439466080-
GWHAAZE00000004CDS3946578539465844-
GWHAAZE00000004CDS3946517639465249-
GWHAAZE00000004CDS3946473139464781-
GWHAAZE00000004CDS3946453039464579-
GWHAAZE00000004CDS3946422039464352-
GWHAAZE00000004CDS3946387839463974-
GWHAAZE00000004CDS3946364139463687-
GWHAAZE00000004CDS3946346339463558-
GWHAAZE00000004CDS3946270439462811-
Transcript Sequence

Network for GWHGAAZE015431

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13401.7AAA_22421715.50E-18
PF17872.2AAA_lid_102232562.80E-06
PF09079.12Cdc6_C3273734.70E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02213CDC6 Cell cycle map04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113

Gene Ontology

GO term OntologyName
GO:0006270biological_processDNA replication initiation
GO:0051301biological_processcell division

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.083
SRR3591706second leaf3.845
SRR3591707mature leaf2.023
SRR3591708Shoot apex5.026
SRR3591709Stem3.914
SRR3591710White floral bud10.372
SRR3591711White flower9.644
SRR3591712Green floral bud13.202
SRR3591713Yellow flower5.276
SRP173429 SRR8316895Juvenile bud stage 20.656
SRR8316896Juvenile bud stage 25.549
SRR8316897Juvenile bud stage 13.886
SRR8316894Third green stage 14.385
SRR8316900Third green stage 27.541
SRR8316901Third green stage 26.304
SRR8316898Complete white stage 7.325
SRR8316899Complete white stage 33.501
SRR8316903Complete white stage 14.510
SRR8316902Silver flowering stage6.898
SRR8316904Silver flowering stage12.889
SRR8316905Silver flowering stage4.491
SRR8316906Gold flowering stage 14.467
SRR8316907Gold flowering stage 13.480
SRR8316908Gold flowering stage 16.126
SRP132670SRR6706286Control17.102
SRR6706287Light intensity 50%18.492
SRR6706288Light intensity 20%19.614
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.525
CNS0095593Slightly white alabastrum(diploid) 217.626
CNS0095594Slightly white alabastrum(diploid) 313.323
CNS0095595Whole white alabastrum(diploid) 214.668
CNS0095596Whole white alabastrum(diploid) 313.214
CNS0095597Whole white alabastrum(diploid) 413.541
CNS0095598Silvery flower (diploied) 121.331
CNS0095599Silvery flower (diploied) 214.945
CNS0095600Silvery flower (diploied) 320.561
CNS0095601Golden flower (diploid) 113.762
CNS0095602Golden flower (diploid) 217.742
CNS0095603Golden flower (diploid) 317.545
CNS0095604Slightly white alabastrum(tetraploid) 121.708
CNS0095605Slightly white alabastrum(tetraploid) 215.277
CNS0095606Slightly white alabastrum(tetraploid) 344.084
CNS0095607Whole white alabastrum(tetraploid) 111.655
CNS0095608Whole white alabastrum(tetraploid) 27.276
CNS0095609Whole white alabastrum(tetraploid) 325.381
CNS0095610Silvery flower (tetraploid) 122.648
CNS0095611Silvery flower (tetraploid) 216.655
CNS0095612Silvery flower (tetraploid) 314.918
CNS0095613Golden flower (tetraploid) 19.550
CNS0095614Golden flower (tetraploid) 216.189
CNS0095615Golden flower (tetraploid) 311.734
CRA001975CRR073297Stem 118.207
CRR073298Stem 214.953
CRR073299Stem 39.873
CRR073300Leaf 117.754
CRR073301Leaf 218.468
CRR073302Leaf 311.433
CRR073303Juvenile bud 110.950
CRR073304Juvenile bud 26.797
CRR073305Juvenile bud 310.170
CRR073306Third green 11.975
CRR073307Third green 22.049
CRR073308Third green 32.974
CRR073309Second white 12.372
CRR073310Second white 22.993
CRR073311Second white 33.363
CRR073312Silver flowering 12.666
CRR073313Silver flowering 22.813
CRR073314Silver flowering 32.680
CRR073315Gold flowering 14.103
CRR073316Gold flowering 26.896
CRR073317Gold flowering 35.015
CRR073318Tawny withering 112.814
CRR073319Tawny withering 211.924
CRR073320Tawny withering 312.185