Detail information of GWHGAAZE015629


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006376315.12.8138E-58hypothetical protein POPTR_0013s11930g [Populus trichocarpa]
Swissprottr|Q8GXW1|RGL2_ARATH4E-17DELLA protein RGL2
trEMBLtr|B9MW61|B9MW61_POPTR1E-58Uncharacterized protein {ECO:0000313|EMBL:ERP54112.1}
TAIR10AT3G03450.12E-15RGA-like 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5099827950998686-
GWHAAZE00000004mRNA5099827950998686-
GWHAAZE00000004exon5099827950998686-
GWHAAZE00000004CDS5099827950998686-
Transcript Sequence

Network for GWHGAAZE015629

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS11322.70E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.157
SRR3591709Stem0.140
SRR3591710White floral bud0.000
SRR3591711White flower0.229
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.715
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.078
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.275
SRR8316904Silver flowering stage0.044
SRR8316905Silver flowering stage0.211
SRR8316906Gold flowering stage 0.385
SRR8316907Gold flowering stage 0.432
SRR8316908Gold flowering stage 0.062
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.000
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.158
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.494
CNS0095599Silvery flower (diploied) 21.176
CNS0095600Silvery flower (diploied) 30.416
CNS0095601Golden flower (diploid) 10.144
CNS0095602Golden flower (diploid) 20.200
CNS0095603Golden flower (diploid) 30.283
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.191
CNS0095611Silvery flower (tetraploid) 20.420
CNS0095612Silvery flower (tetraploid) 30.058
CNS0095613Golden flower (tetraploid) 11.589
CNS0095614Golden flower (tetraploid) 20.361
CNS0095615Golden flower (tetraploid) 31.298
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.000
CRR073299Stem 30.000
CRR073300Leaf 10.000
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.049
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.074
CRR073311Second white 30.000
CRR073312Silver flowering 10.058
CRR073313Silver flowering 20.041
CRR073314Silver flowering 30.204
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.097
CRR073319Tawny withering 20.094
CRR073320Tawny withering 30.000