Detail information of GWHGAAZE015630


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007199010.14.33405E-98hypothetical protein PRUPE_ppa017519mg [Prunus persica]
Swissprottr|Q9AVK4|SCR_PEA4E-21Protein SCARECROW
trEMBLtr|M5VGL5|M5VGL5_PRUPE2E-98Uncharacterized protein {ECO:0000313|EMBL:EMJ00209.1}
TAIR10AT3G54220.17E-19GRAS family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5099897250999673-
GWHAAZE00000004mRNA5099897250999673-
GWHAAZE00000004exon5099897250999673-
GWHAAZE00000004CDS5099897250999673-
Transcript Sequence

Network for GWHGAAZE015630

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS762181.00E-35
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.051
SRR3591709Stem0.297
SRR3591710White floral bud0.094
SRR3591711White flower0.175
SRR3591712Green floral bud0.064
SRR3591713Yellow flower0.328
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.048
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.110
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.269
SRR8316904Silver flowering stage0.299
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.620
SRR8316907Gold flowering stage 0.795
SRR8316908Gold flowering stage 0.502
SRP132670SRR6706286Control0.016
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.000
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.564
CNS0095599Silvery flower (diploied) 20.352
CNS0095600Silvery flower (diploied) 30.271
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.284
CNS0095603Golden flower (diploid) 30.574
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.386
CNS0095611Silvery flower (tetraploid) 20.683
CNS0095612Silvery flower (tetraploid) 31.018
CNS0095613Golden flower (tetraploid) 11.003
CNS0095614Golden flower (tetraploid) 20.317
CNS0095615Golden flower (tetraploid) 34.583
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.000
CRR073299Stem 30.000
CRR073300Leaf 10.000
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.049
CRR073307Third green 20.041
CRR073308Third green 30.000
CRR073309Second white 10.232
CRR073310Second white 20.031
CRR073311Second white 30.538
CRR073312Silver flowering 10.205
CRR073313Silver flowering 20.273
CRR073314Silver flowering 30.554
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000