Detail information of GWHGAAZE015641


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011090124.12.77613E-56PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X1 [Sesamum indicum]
trEMBLtr|A0A022QWJ4|A0A022QWJ4_ERYGU3E-55Uncharacterized protein {ECO:0000313|EMBL:EYU31939.1}
TAIR10AT1G02080.15E-48transcription regulators

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5153988151541016-
GWHAAZE00000004mRNA5153988151541016-
GWHAAZE00000004exon5154085051541016-
GWHAAZE00000004exon5154010251540255-
GWHAAZE00000004exon5153988151540015-
GWHAAZE00000004CDS5154085051541016-
GWHAAZE00000004CDS5154010251540255-
GWHAAZE00000004CDS5153988151540015-
Transcript Sequence

Network for GWHGAAZE015641

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04054.16Not1521473.00E-40
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K12604CNOT1, NOT1 RNA degradation map03018

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.090
SRR3591706second leaf11.640
SRR3591707mature leaf12.395
SRR3591708Shoot apex3.717
SRR3591709Stem3.537
SRR3591710White floral bud0.892
SRR3591711White flower1.109
SRR3591712Green floral bud0.534
SRR3591713Yellow flower0.388
SRP173429 SRR8316895Juvenile bud stage 3.501
SRR8316896Juvenile bud stage 3.139
SRR8316897Juvenile bud stage 1.997
SRR8316894Third green stage 2.118
SRR8316900Third green stage 3.272
SRR8316901Third green stage 3.993
SRR8316898Complete white stage 1.382
SRR8316899Complete white stage 4.837
SRR8316903Complete white stage 3.404
SRR8316902Silver flowering stage1.976
SRR8316904Silver flowering stage2.642
SRR8316905Silver flowering stage0.710
SRR8316906Gold flowering stage 1.498
SRR8316907Gold flowering stage 1.676
SRR8316908Gold flowering stage 3.723
SRP132670SRR6706286Control1.498
SRR6706287Light intensity 50%2.034
SRR6706288Light intensity 20%1.566
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.196
CNS0095593Slightly white alabastrum(diploid) 24.315
CNS0095594Slightly white alabastrum(diploid) 33.046
CNS0095595Whole white alabastrum(diploid) 22.166
CNS0095596Whole white alabastrum(diploid) 33.207
CNS0095597Whole white alabastrum(diploid) 43.033
CNS0095598Silvery flower (diploied) 15.858
CNS0095599Silvery flower (diploied) 21.844
CNS0095600Silvery flower (diploied) 34.193
CNS0095601Golden flower (diploid) 13.073
CNS0095602Golden flower (diploid) 23.178
CNS0095603Golden flower (diploid) 32.333
CNS0095604Slightly white alabastrum(tetraploid) 10.939
CNS0095605Slightly white alabastrum(tetraploid) 21.770
CNS0095606Slightly white alabastrum(tetraploid) 32.555
CNS0095607Whole white alabastrum(tetraploid) 10.308
CNS0095608Whole white alabastrum(tetraploid) 20.139
CNS0095609Whole white alabastrum(tetraploid) 31.685
CNS0095610Silvery flower (tetraploid) 11.979
CNS0095611Silvery flower (tetraploid) 21.021
CNS0095612Silvery flower (tetraploid) 30.850
CNS0095613Golden flower (tetraploid) 10.639
CNS0095614Golden flower (tetraploid) 21.608
CNS0095615Golden flower (tetraploid) 30.330
CRA001975CRR073297Stem 14.270
CRR073298Stem 23.294
CRR073299Stem 30.561
CRR073300Leaf 12.008
CRR073301Leaf 23.298
CRR073302Leaf 32.799
CRR073303Juvenile bud 11.780
CRR073304Juvenile bud 20.483
CRR073305Juvenile bud 31.331
CRR073306Third green 10.179
CRR073307Third green 20.000
CRR073308Third green 30.017
CRR073309Second white 10.000
CRR073310Second white 20.505
CRR073311Second white 30.234
CRR073312Silver flowering 10.389
CRR073313Silver flowering 20.039
CRR073314Silver flowering 30.712
CRR073315Gold flowering 10.440
CRR073316Gold flowering 23.917
CRR073317Gold flowering 30.265
CRR073318Tawny withering 11.579
CRR073319Tawny withering 21.170
CRR073320Tawny withering 31.670