Detail information of GWHGAAZE015718


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACJ11758.17.50313E-27arabinose kinase [Gossypium hirsutum]
Swissprottr|O23461|ARAK_ARATH8E-25L-arabinokinase
trEMBLtr|D2D338|D2D338_GOSHI3E-27Arabinose kinase {ECO:0000313|EMBL:ACJ11758.1} (Fragment)
TAIR10AT4G16130.12E-22arabinose kinase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5450704754508404-
GWHAAZE00000004mRNA5450704754508404-
GWHAAZE00000004exon5450704754507185-
GWHAAZE00000004exon5450746154507564-
GWHAAZE00000004exon5450827354508404-
GWHAAZE00000004CDS5450827354508404-
GWHAAZE00000004CDS5450746154507564-
GWHAAZE00000004CDS5450704754507185-
Transcript Sequence

Network for GWHGAAZE015718

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06203.15CCT8441.70E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
K12446E2.7.1.46 Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.911
SRR3591706second leaf0.623
SRR3591707mature leaf0.402
SRR3591708Shoot apex0.613
SRR3591709Stem0.918
SRR3591710White floral bud0.680
SRR3591711White flower0.598
SRR3591712Green floral bud0.890
SRR3591713Yellow flower0.755
SRP173429 SRR8316895Juvenile bud stage 0.982
SRR8316896Juvenile bud stage 0.679
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.813
SRR8316900Third green stage 2.690
SRR8316901Third green stage 1.704
SRR8316898Complete white stage 0.141
SRR8316899Complete white stage 2.874
SRR8316903Complete white stage 0.378
SRR8316902Silver flowering stage0.478
SRR8316904Silver flowering stage0.847
SRR8316905Silver flowering stage0.180
SRR8316906Gold flowering stage 0.101
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.337
SRP132670SRR6706286Control1.314
SRR6706287Light intensity 50%1.327
SRR6706288Light intensity 20%1.266
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.792
CNS0095593Slightly white alabastrum(diploid) 20.164
CNS0095594Slightly white alabastrum(diploid) 30.639
CNS0095595Whole white alabastrum(diploid) 21.949
CNS0095596Whole white alabastrum(diploid) 30.944
CNS0095597Whole white alabastrum(diploid) 41.301
CNS0095598Silvery flower (diploied) 10.798
CNS0095599Silvery flower (diploied) 20.114
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.559
CNS0095602Golden flower (diploid) 20.356
CNS0095603Golden flower (diploid) 30.216
CNS0095604Slightly white alabastrum(tetraploid) 10.032
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.286
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.064
CNS0095612Silvery flower (tetraploid) 30.044
CNS0095613Golden flower (tetraploid) 10.056
CNS0095614Golden flower (tetraploid) 20.060
CNS0095615Golden flower (tetraploid) 30.057
CRA001975CRR073297Stem 12.192
CRR073298Stem 21.237
CRR073299Stem 30.323
CRR073300Leaf 11.334
CRR073301Leaf 21.012
CRR073302Leaf 30.336
CRR073303Juvenile bud 10.196
CRR073304Juvenile bud 20.067
CRR073305Juvenile bud 31.904
CRR073306Third green 10.041
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.262
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.223
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000