Detail information of GWHGAAZE015751


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008353740.11.31305E-42PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Malus domestica]
Swissprottr|O82043|ILV5_PEA2E-40Ketol-acid reductoisomerase, chloroplastic (Precursor)
trEMBLtr|B9H2D0|B9H2D0_POPTR2E-41Uncharacterized protein {ECO:0000313|EMBL:EEE86226.2} (Fragment)
TAIR10AT3G58610.34E-33ketol-acid reductoisomerase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5550683855508116-
GWHAAZE00000004mRNA5550683855508116-
GWHAAZE00000004exon5550683855506920-
GWHAAZE00000004exon5550702555507100-
GWHAAZE00000004exon5550800955508116-
GWHAAZE00000004CDS5550800955508116-
GWHAAZE00000004CDS5550702555507100-
GWHAAZE00000004CDS5550683855506920-
Transcript Sequence

Network for GWHGAAZE015751

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07991.13IlvN26792.50E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00053ilvC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Valine, leucine and isoleucine biosynthesismap00290
Pantothenate and CoA biosynthesismap00770

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.496
SRR3591711White flower0.476
SRR3591712Green floral bud1.624
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.444
SRR8316896Juvenile bud stage 2.388
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 1.134
SRR8316900Third green stage 3.806
SRR8316901Third green stage 3.625
SRR8316898Complete white stage 0.286
SRR8316899Complete white stage 2.842
SRR8316903Complete white stage 0.424
SRR8316902Silver flowering stage0.605
SRR8316904Silver flowering stage1.042
SRR8316905Silver flowering stage0.477
SRR8316906Gold flowering stage 1.276
SRR8316907Gold flowering stage 0.459
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.937
SRR6706287Light intensity 50%1.365
SRR6706288Light intensity 20%1.794
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.534
CNS0095593Slightly white alabastrum(diploid) 24.213
CNS0095594Slightly white alabastrum(diploid) 32.788
CNS0095595Whole white alabastrum(diploid) 24.060
CNS0095596Whole white alabastrum(diploid) 33.943
CNS0095597Whole white alabastrum(diploid) 42.673
CNS0095598Silvery flower (diploied) 12.405
CNS0095599Silvery flower (diploied) 20.757
CNS0095600Silvery flower (diploied) 30.817
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.550
CNS0095603Golden flower (diploid) 30.592
CNS0095604Slightly white alabastrum(tetraploid) 14.652
CNS0095605Slightly white alabastrum(tetraploid) 24.981
CNS0095606Slightly white alabastrum(tetraploid) 33.607
CNS0095607Whole white alabastrum(tetraploid) 13.338
CNS0095608Whole white alabastrum(tetraploid) 24.059
CNS0095609Whole white alabastrum(tetraploid) 33.629
CNS0095610Silvery flower (tetraploid) 10.993
CNS0095611Silvery flower (tetraploid) 20.739
CNS0095612Silvery flower (tetraploid) 31.269
CNS0095613Golden flower (tetraploid) 10.565
CNS0095614Golden flower (tetraploid) 21.443
CNS0095615Golden flower (tetraploid) 30.534
CRA001975CRR073297Stem 13.481
CRR073298Stem 22.295
CRR073299Stem 31.982
CRR073300Leaf 12.150
CRR073301Leaf 21.881
CRR073302Leaf 31.424
CRR073303Juvenile bud 10.474
CRR073304Juvenile bud 21.016
CRR073305Juvenile bud 30.032
CRR073306Third green 10.582
CRR073307Third green 20.120
CRR073308Third green 30.685
CRR073309Second white 10.000
CRR073310Second white 20.073
CRR073311Second white 31.104
CRR073312Silver flowering 10.112
CRR073313Silver flowering 20.199
CRR073314Silver flowering 30.129
CRR073315Gold flowering 11.223
CRR073316Gold flowering 20.624
CRR073317Gold flowering 30.000
CRR073318Tawny withering 11.300
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.821