Detail information of GWHGAAZE015767


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002280075.21.27026E-62PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Vitis vinifera]
Swissprottr|Q9SCT4|IMK2_ARATH3E-37Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 (Precursor)
trEMBLtr|F6HP05|F6HP05_VITVI5E-63Putative uncharacterized protein {ECO:0000313|EMBL:CCB56411.1}
TAIR10AT3G51740.15E-34inflorescence meristem receptor-like kinase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5621078256213221+
GWHAAZE00000004mRNA5621078256213221+
GWHAAZE00000004exon5621078256211175+
GWHAAZE00000004exon5621281856213221+
GWHAAZE00000004CDS5621078256211175+
GWHAAZE00000004CDS5621281856213221+
Transcript Sequence

Network for GWHGAAZE015767

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08263.13LRRNT_226667.20E-08
PF13855.7LRR_8901296.20E-07
PF00560.34LRR_11431621.1
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.758
SRR3591707mature leaf1.094
SRR3591708Shoot apex0.223
SRR3591709Stem0.412
SRR3591710White floral bud0.083
SRR3591711White flower0.092
SRR3591712Green floral bud0.164
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.214
SRR8316896Juvenile bud stage 0.299
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.402
SRR8316901Third green stage 0.131
SRR8316898Complete white stage 0.199
SRR8316899Complete white stage 1.327
SRR8316903Complete white stage 0.514
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.944
SRR6706287Light intensity 50%1.353
SRR6706288Light intensity 20%1.799
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.040
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.182
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.102
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.307
CRR073298Stem 20.108
CRR073299Stem 30.476
CRR073300Leaf 10.218
CRR073301Leaf 20.361
CRR073302Leaf 30.080
CRR073303Juvenile bud 10.816
CRR073304Juvenile bud 20.793
CRR073305Juvenile bud 30.219
CRR073306Third green 10.039
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.252
CRR073316Gold flowering 20.153
CRR073317Gold flowering 30.192
CRR073318Tawny withering 10.454
CRR073319Tawny withering 20.239
CRR073320Tawny withering 30.818