Detail information of GWHGAAZE015813


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010664265.10PREDICTED: uncharacterized protein LOC100245365 isoform X1 [Vitis vinifera]
Swissprottr|Q9C5X4|ATX1_ARATH9E-19Histone-lysine N-methyltransferase ATX1
trEMBLtr|A0A061FNT5|A0A061FNT5_THECC0Phd finger protein, putative isoform 1 {ECO:0000313|EMBL:EOY16154.1}
TAIR10AT1G77800.25E-135PHD finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5790364957924750-
GWHAAZE00000004mRNA5790364957924750-
GWHAAZE00000004exon5792455157924750-
GWHAAZE00000004exon5792361157923932-
GWHAAZE00000004exon5792317057923253-
GWHAAZE00000004exon5792222457922605-
GWHAAZE00000004exon5792189257921938-
GWHAAZE00000004exon5792098357921043-
GWHAAZE00000004exon5792087057920905-
GWHAAZE00000004exon5791203957912180-
GWHAAZE00000004exon5791157557911681-
GWHAAZE00000004exon5791129157911503-
GWHAAZE00000004exon5791042457910524-
GWHAAZE00000004exon5790970357909933-
GWHAAZE00000004exon5790911857909339-
GWHAAZE00000004exon5790895757909010-
GWHAAZE00000004exon5790840557908470-
GWHAAZE00000004exon5790815057908290-
GWHAAZE00000004exon5790772557907778-
GWHAAZE00000004exon5790600057906059-
GWHAAZE00000004exon5790497457905285-
GWHAAZE00000004exon5790364957903816-
GWHAAZE00000004CDS5792455157924750-
GWHAAZE00000004CDS5792361157923932-
GWHAAZE00000004CDS5792317057923253-
GWHAAZE00000004CDS5792222457922605-
GWHAAZE00000004CDS5792189257921938-
GWHAAZE00000004CDS5792098357921043-
GWHAAZE00000004CDS5792087057920905-
GWHAAZE00000004CDS5791203957912180-
GWHAAZE00000004CDS5791157557911681-
GWHAAZE00000004CDS5791129157911503-
GWHAAZE00000004CDS5791042457910524-
GWHAAZE00000004CDS5790970357909933-
GWHAAZE00000004CDS5790911857909339-
GWHAAZE00000004CDS5790895757909010-
GWHAAZE00000004CDS5790840557908470-
GWHAAZE00000004CDS5790815057908290-
GWHAAZE00000004CDS5790772557907778-
GWHAAZE00000004CDS5790600057906059-
GWHAAZE00000004CDS5790497457905285-
GWHAAZE00000004CDS5790364957903816-
Transcript Sequence

Network for GWHGAAZE015813

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13831.7PHD_26336662.30E-10
PF13832.7zf-HC5HC2H_26907964.50E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.220
SRR3591706second leaf16.408
SRR3591707mature leaf26.307
SRR3591708Shoot apex19.817
SRR3591709Stem17.684
SRR3591710White floral bud19.815
SRR3591711White flower21.776
SRR3591712Green floral bud18.863
SRR3591713Yellow flower21.271
SRP173429 SRR8316895Juvenile bud stage 9.975
SRR8316896Juvenile bud stage 13.795
SRR8316897Juvenile bud stage 5.945
SRR8316894Third green stage 6.660
SRR8316900Third green stage 12.317
SRR8316901Third green stage 12.226
SRR8316898Complete white stage 3.063
SRR8316899Complete white stage 11.188
SRR8316903Complete white stage 9.629
SRR8316902Silver flowering stage5.384
SRR8316904Silver flowering stage9.522
SRR8316905Silver flowering stage3.637
SRR8316906Gold flowering stage 11.716
SRR8316907Gold flowering stage 11.096
SRR8316908Gold flowering stage 13.694
SRP132670SRR6706286Control8.730
SRR6706287Light intensity 50%10.197
SRR6706288Light intensity 20%10.949
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.723
CNS0095593Slightly white alabastrum(diploid) 25.524
CNS0095594Slightly white alabastrum(diploid) 36.450
CNS0095595Whole white alabastrum(diploid) 27.018
CNS0095596Whole white alabastrum(diploid) 35.553
CNS0095597Whole white alabastrum(diploid) 46.919
CNS0095598Silvery flower (diploied) 110.253
CNS0095599Silvery flower (diploied) 28.539
CNS0095600Silvery flower (diploied) 315.966
CNS0095601Golden flower (diploid) 111.657
CNS0095602Golden flower (diploid) 219.334
CNS0095603Golden flower (diploid) 318.008
CNS0095604Slightly white alabastrum(tetraploid) 19.247
CNS0095605Slightly white alabastrum(tetraploid) 26.797
CNS0095606Slightly white alabastrum(tetraploid) 318.015
CNS0095607Whole white alabastrum(tetraploid) 17.503
CNS0095608Whole white alabastrum(tetraploid) 25.716
CNS0095609Whole white alabastrum(tetraploid) 312.033
CNS0095610Silvery flower (tetraploid) 117.059
CNS0095611Silvery flower (tetraploid) 218.461
CNS0095612Silvery flower (tetraploid) 314.220
CNS0095613Golden flower (tetraploid) 19.068
CNS0095614Golden flower (tetraploid) 215.867
CNS0095615Golden flower (tetraploid) 317.998
CRA001975CRR073297Stem 118.857
CRR073298Stem 216.248
CRR073299Stem 313.020
CRR073300Leaf 118.618
CRR073301Leaf 214.859
CRR073302Leaf 310.446
CRR073303Juvenile bud 111.064
CRR073304Juvenile bud 27.575
CRR073305Juvenile bud 315.568
CRR073306Third green 15.057
CRR073307Third green 23.657
CRR073308Third green 35.481
CRR073309Second white 13.235
CRR073310Second white 27.209
CRR073311Second white 37.762
CRR073312Silver flowering 16.896
CRR073313Silver flowering 25.225
CRR073314Silver flowering 35.543
CRR073315Gold flowering 17.513
CRR073316Gold flowering 213.796
CRR073317Gold flowering 35.797
CRR073318Tawny withering 113.668
CRR073319Tawny withering 213.828
CRR073320Tawny withering 311.207