Detail information of GWHGAAZE015838


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU22924.19.647E-166hypothetical protein MIMGU_mgv1a006553mg [Erythranthe guttata]
trEMBLtr|A0A022Q5P3|A0A022Q5P3_ERYGU4E-166Uncharacterized protein {ECO:0000313|EMBL:EYU22924.1}
TAIR10AT1G75710.17E-82C2H2-like zinc finger protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5957212559576485-
GWHAAZE00000004mRNA5957212559576485-
GWHAAZE00000004exon5957577159576485-
GWHAAZE00000004exon5957212559572729-
GWHAAZE00000004CDS5957577159576485-
GWHAAZE00000004CDS5957212559572729-
Transcript Sequence

Network for GWHGAAZE015838

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.916
SRR3591706second leaf9.505
SRR3591707mature leaf1.316
SRR3591708Shoot apex41.124
SRR3591709Stem14.571
SRR3591710White floral bud3.077
SRR3591711White flower3.917
SRR3591712Green floral bud6.339
SRR3591713Yellow flower0.130
SRP173429 SRR8316895Juvenile bud stage 5.445
SRR8316896Juvenile bud stage 3.242
SRR8316897Juvenile bud stage 1.695
SRR8316894Third green stage 2.581
SRR8316900Third green stage 2.275
SRR8316901Third green stage 1.959
SRR8316898Complete white stage 0.041
SRR8316899Complete white stage 5.222
SRR8316903Complete white stage 1.640
SRR8316902Silver flowering stage0.092
SRR8316904Silver flowering stage0.104
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.110
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.070
SRP132670SRR6706286Control1.492
SRR6706287Light intensity 50%1.402
SRR6706288Light intensity 20%1.269
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.082
CNS0095593Slightly white alabastrum(diploid) 22.996
CNS0095594Slightly white alabastrum(diploid) 32.430
CNS0095595Whole white alabastrum(diploid) 23.478
CNS0095596Whole white alabastrum(diploid) 30.728
CNS0095597Whole white alabastrum(diploid) 41.994
CNS0095598Silvery flower (diploied) 118.421
CNS0095599Silvery flower (diploied) 29.540
CNS0095600Silvery flower (diploied) 33.977
CNS0095601Golden flower (diploid) 110.310
CNS0095602Golden flower (diploid) 29.658
CNS0095603Golden flower (diploid) 38.436
CNS0095604Slightly white alabastrum(tetraploid) 17.429
CNS0095605Slightly white alabastrum(tetraploid) 27.326
CNS0095606Slightly white alabastrum(tetraploid) 317.808
CNS0095607Whole white alabastrum(tetraploid) 12.321
CNS0095608Whole white alabastrum(tetraploid) 21.272
CNS0095609Whole white alabastrum(tetraploid) 33.949
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.790
CNS0095612Silvery flower (tetraploid) 30.536
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.109
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 115.378
CRR073298Stem 212.746
CRR073299Stem 319.416
CRR073300Leaf 14.465
CRR073301Leaf 23.717
CRR073302Leaf 33.148
CRR073303Juvenile bud 11.939
CRR073304Juvenile bud 20.485
CRR073305Juvenile bud 32.836
CRR073306Third green 10.000
CRR073307Third green 20.282
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.103
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.087
CRR073314Silver flowering 30.025
CRR073315Gold flowering 117.748
CRR073316Gold flowering 225.770
CRR073317Gold flowering 323.525
CRR073318Tawny withering 126.696
CRR073319Tawny withering 215.978
CRR073320Tawny withering 323.848