Detail information of GWHGAAZE015843


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002307416.10putative phosphatidylinositol-4-phosphate 5-kinase mRNA family protein [Populus trichocarpa]
Swissprottr|Q56YP2|PI5K1_ARATH0Phosphatidylinositol 4-phosphate 5-kinase 1
trEMBLtr|B9H7A5|B9H7A5_POPTR0Putative phosphatidylinositol-4-phosphate 5-kinase mRNA family protein {ECO:0000313|EMBL:EEE94412.1}
TAIR10AT1G21980.10phosphatidylinositol-4-phosphate 5-kinase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5984971659854690+
GWHAAZE00000004mRNA5984971659854690+
GWHAAZE00000004exon5984971659850296+
GWHAAZE00000004exon5985085959851464+
GWHAAZE00000004exon5985154559851645+
GWHAAZE00000004exon5985209559852234+
GWHAAZE00000004exon5985235959852469+
GWHAAZE00000004exon5985276259852955+
GWHAAZE00000004exon5985306759853197+
GWHAAZE00000004exon5985327559853368+
GWHAAZE00000004exon5985416859854690+
GWHAAZE00000004CDS5984971659850296+
GWHAAZE00000004CDS5985085959851464+
GWHAAZE00000004CDS5985154559851645+
GWHAAZE00000004CDS5985209559852234+
GWHAAZE00000004CDS5985235959852469+
GWHAAZE00000004CDS5985276259852955+
GWHAAZE00000004CDS5985306759853197+
GWHAAZE00000004CDS5985327559853368+
GWHAAZE00000004CDS5985416859854477+
GWHAAZE00000004three_prime_UTR5985447859854690+
Transcript Sequence

Network for GWHGAAZE015843

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02493.21MORN881103.30E-06
PF02493.21MORN1111321.40E-07
PF02493.21MORN1341560.00088
PF02493.21MORN1571780.00064
PF02493.21MORN1802012.80E-06
PF02493.21MORN2032259.80E-07
PF02493.21MORN2262472.70E-07
PF01504.19PIP5K4417492.50E-97
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00889PIP5K Metabolic pathways map01100
Inositol phosphate metabolismmap00562
MAPK signaling pathway - yeastmap04011
Phosphatidylinositol signaling systemmap04070
Phospholipase D signaling pathwaymap04072
Endocytosismap04144
Mitophagy - yeastmap04139
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Fc gamma R-mediated phagocytosismap04666

Gene Ontology

GO term OntologyName
GO:0046488biological_processphosphatidylinositol metabolic process
GO:0016307molecular_functionphosphatidylinositol phosphate kinase activity
GO:0005524molecular_functionATP binding
GO:0016308molecular_function1-phosphatidylinositol-4-phosphate 5-kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.200
SRR3591706second leaf24.452
SRR3591707mature leaf21.493
SRR3591708Shoot apex14.252
SRR3591709Stem10.226
SRR3591710White floral bud11.042
SRR3591711White flower9.972
SRR3591712Green floral bud13.128
SRR3591713Yellow flower11.806
SRP173429 SRR8316895Juvenile bud stage 4.348
SRR8316896Juvenile bud stage 5.922
SRR8316897Juvenile bud stage 2.022
SRR8316894Third green stage 4.943
SRR8316900Third green stage 14.428
SRR8316901Third green stage 12.328
SRR8316898Complete white stage 2.916
SRR8316899Complete white stage 8.109
SRR8316903Complete white stage 5.045
SRR8316902Silver flowering stage1.955
SRR8316904Silver flowering stage3.479
SRR8316905Silver flowering stage1.399
SRR8316906Gold flowering stage 3.971
SRR8316907Gold flowering stage 3.552
SRR8316908Gold flowering stage 2.350
SRP132670SRR6706286Control10.399
SRR6706287Light intensity 50%10.715
SRR6706288Light intensity 20%9.623
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.544
CNS0095593Slightly white alabastrum(diploid) 24.139
CNS0095594Slightly white alabastrum(diploid) 34.131
CNS0095595Whole white alabastrum(diploid) 24.883
CNS0095596Whole white alabastrum(diploid) 34.176
CNS0095597Whole white alabastrum(diploid) 44.795
CNS0095598Silvery flower (diploied) 12.444
CNS0095599Silvery flower (diploied) 21.788
CNS0095600Silvery flower (diploied) 36.444
CNS0095601Golden flower (diploid) 12.837
CNS0095602Golden flower (diploid) 25.168
CNS0095603Golden flower (diploid) 34.945
CNS0095604Slightly white alabastrum(tetraploid) 16.773
CNS0095605Slightly white alabastrum(tetraploid) 26.187
CNS0095606Slightly white alabastrum(tetraploid) 316.617
CNS0095607Whole white alabastrum(tetraploid) 15.116
CNS0095608Whole white alabastrum(tetraploid) 23.883
CNS0095609Whole white alabastrum(tetraploid) 38.955
CNS0095610Silvery flower (tetraploid) 18.243
CNS0095611Silvery flower (tetraploid) 29.432
CNS0095612Silvery flower (tetraploid) 36.564
CNS0095613Golden flower (tetraploid) 15.296
CNS0095614Golden flower (tetraploid) 28.453
CNS0095615Golden flower (tetraploid) 38.786
CRA001975CRR073297Stem 113.449
CRR073298Stem 214.816
CRR073299Stem 38.812
CRR073300Leaf 115.705
CRR073301Leaf 218.361
CRR073302Leaf 310.043
CRR073303Juvenile bud 19.305
CRR073304Juvenile bud 27.600
CRR073305Juvenile bud 312.395
CRR073306Third green 15.200
CRR073307Third green 22.592
CRR073308Third green 34.184
CRR073309Second white 13.091
CRR073310Second white 24.656
CRR073311Second white 34.374
CRR073312Silver flowering 12.616
CRR073313Silver flowering 22.608
CRR073314Silver flowering 33.284
CRR073315Gold flowering 14.472
CRR073316Gold flowering 25.055
CRR073317Gold flowering 33.379
CRR073318Tawny withering 14.542
CRR073319Tawny withering 24.833
CRR073320Tawny withering 35.470