Gene detail

Detail information of GWHGAAZE015844

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010034409.1	3.551E-113	PREDICTED: receptor-like protein kinase FERONIA [Eucalyptus grandis]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	8E-103	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A059ADR7\|A0A059ADR7_EUCGR	1E-113	Uncharacterized protein {ECO:0000313\|EMBL:KCW51943.1}
TAIR10	AT3G51550.1	1E-80	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	59947596	59948594	+
GWHAAZE00000004	mRNA	59947596	59948594	+
GWHAAZE00000004	exon	59947596	59948594	+
GWHAAZE00000004	CDS	59947596	59948594	+

Transcript Sequence
>GWHTAAZE015860 ATGTGCCGTCACTTTACATTTGCTGAGATTCGGTCTGCCACCCACAACTTTAATGATGCATTTGTCATTGGGAAGGGCGGATTTGGAAAAGTTTACAAAGGATTCGTCGATAATGGAGCAACTGCCGTTGCTATAAAGCGGCTGGATCCCATGTCCAACCAAGGAGGCACCGAGTTTCGCACAGAAATCAAGATGCTTTCAAAGTTTCGACATTGCAATCTTGTGACTCTCATTGGCTACTGCGATGATGTTCATGAGATGATCCTTGCTTATGAATATATGCTCAATGGAACCTTGGCCGATCATTTGCACCCAATAGATGGTCGAAATAATCATAGCTCCATTTTACCATGGGTACAACGCCTCAAGATATGCATATGGGCTGCTCGTGGAATAGAGTATCTTCATACTGGTACATGTGTTCTGCGAAGGGTCATACATAGGGATGTGAAAAGCACAAACATTCTGTTGGATGAAAATTGGGCAGCTAAGGTTTCAGACTTTCGGTTATGCAAAATAGGTCCGGCAAACCAGTCATGCACCCATGTCAGCACCTGCATTAAAGGAACCCCTGGCTATTGCGATCCAGAGTATTTCTTAACACATCGATTGACGAAGAAATCTGATGTCTATTCCTTCGGGGTGGTGTTGTTTGAAATTCTATCTGGGAAGCCGGCACTAGATTTTAGACTTCCCAAGGAAAAAAGGAGTCTTGTGGCACGGGCCCAACAAGGTCTACAGGAAAATAACATACATCAGTTTATCGATCCCAATTTGAAGTGGGAAATTTGCTCAAATTCTTTGAAAGCGTTTGTGGAAATTGCAGATCAATGTTTGCAAAATGATTCAAAGAAACGATCTAAAATGGCTGAGGTTGTGGCAACGCTTGAGTTTGCATTGGCAGCGCAGACGAGCAAGGATTCTTCTCTACTCGCCGAGGATGTCTTTGATTTTGGTGGGACTTATGACGACCAAGAAAGGGCGGGCTCCCTTACGTAG

Network for GWHGAAZE015844

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	22	294	2.10E-45

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	1.070
	SRR3591707	mature leaf	0.963
	SRR3591708	Shoot apex	0.487
	SRR3591709	Stem	0.208
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.965
	SRR8316896	Juvenile bud stage	2.028
	SRR8316897	Juvenile bud stage	0.215
	SRR8316894	Third green stage	0.747
	SRR8316900	Third green stage	1.958
	SRR8316901	Third green stage	2.211
	SRR8316898	Complete white stage	1.937
	SRR8316899	Complete white stage	1.757
	SRR8316903	Complete white stage	2.472
	SRR8316902	Silver flowering stage	3.256
	SRR8316904	Silver flowering stage	3.375
	SRR8316905	Silver flowering stage	1.282
	SRR8316906	Gold flowering stage	8.500
	SRR8316907	Gold flowering stage	9.748
	SRR8316908	Gold flowering stage	4.393
SRP132670	SRR6706286	Control	2.448
	SRR6706287	Light intensity 50%	2.402
	SRR6706288	Light intensity 20%	2.581
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.796
	CNS0095593	Slightly white alabastrum(diploid) 2	0.857
	CNS0095594	Slightly white alabastrum(diploid) 3	1.285
	CNS0095595	Whole white alabastrum(diploid) 2	1.178
	CNS0095596	Whole white alabastrum(diploid) 3	1.469
	CNS0095597	Whole white alabastrum(diploid) 4	1.991
	CNS0095598	Silvery flower (diploied) 1	3.756
	CNS0095599	Silvery flower (diploied) 2	1.054
	CNS0095600	Silvery flower (diploied) 3	6.554
	CNS0095601	Golden flower (diploid) 1	2.694
	CNS0095602	Golden flower (diploid) 2	7.458
	CNS0095603	Golden flower (diploid) 3	8.134
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.167
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.685
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.490
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.600
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.766
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.853
	CNS0095610	Silvery flower (tetraploid) 1	3.210
	CNS0095611	Silvery flower (tetraploid) 2	2.431
	CNS0095612	Silvery flower (tetraploid) 3	6.572
	CNS0095613	Golden flower (tetraploid) 1	5.642
	CNS0095614	Golden flower (tetraploid) 2	5.998
	CNS0095615	Golden flower (tetraploid) 3	3.643
CRA001975	CRR073297	Stem 1	2.880
	CRR073298	Stem 2	1.309
	CRR073299	Stem 3	1.509
	CRR073300	Leaf 1	1.274
	CRR073301	Leaf 2	0.989
	CRR073302	Leaf 3	1.067
	CRR073303	Juvenile bud 1	1.638
	CRR073304	Juvenile bud 2	0.969
	CRR073305	Juvenile bud 3	0.402
	CRR073306	Third green 1	0.729
	CRR073307	Third green 2	0.048
	CRR073308	Third green 3	0.749
	CRR073309	Second white 1	0.396
	CRR073310	Second white 2	1.825
	CRR073311	Second white 3	1.322
	CRR073312	Silver flowering 1	4.067
	CRR073313	Silver flowering 2	1.685
	CRR073314	Silver flowering 3	3.421
	CRR073315	Gold flowering 1	0.177
	CRR073316	Gold flowering 2	0.126
	CRR073317	Gold flowering 3	1.066
	CRR073318	Tawny withering 1	1.088
	CRR073319	Tawny withering 2	0.553
	CRR073320	Tawny withering 3	0.317