Detail information of GWHGAAZE015883


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI19044.33.52059E-59unnamed protein product [Vitis vinifera]
Swissprottr|P0CH30|RING1_GOSHI7E-32E3 ubiquitin-protein ligase RING1
trEMBLtr|F6H0T2|F6H0T2_VITVI2E-59Putative uncharacterized protein {ECO:0000313|EMBL:CCB45501.1}
TAIR10AT1G60360.14E-26RING/U-box superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene6210293162103575+
GWHAAZE00000004mRNA6210293162103575+
GWHAAZE00000004exon6210293162103575+
GWHAAZE00000004CDS6210293162103575+
Transcript Sequence

Network for GWHGAAZE015883

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13639.7zf-RING_21201621.50E-12
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.223
SRR3591706second leaf0.970
SRR3591707mature leaf0.628
SRR3591708Shoot apex0.905
SRR3591709Stem6.018
SRR3591710White floral bud0.853
SRR3591711White flower0.879
SRR3591712Green floral bud2.585
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.483
SRR8316896Juvenile bud stage 0.650
SRR8316897Juvenile bud stage 0.260
SRR8316894Third green stage 0.359
SRR8316900Third green stage 1.592
SRR8316901Third green stage 2.320
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 1.273
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.220
SRR8316904Silver flowering stage0.072
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.405
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.377
SRR6706287Light intensity 50%0.469
SRR6706288Light intensity 20%0.545
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.347
CNS0095593Slightly white alabastrum(diploid) 23.554
CNS0095594Slightly white alabastrum(diploid) 33.614
CNS0095595Whole white alabastrum(diploid) 21.606
CNS0095596Whole white alabastrum(diploid) 32.615
CNS0095597Whole white alabastrum(diploid) 40.462
CNS0095598Silvery flower (diploied) 10.160
CNS0095599Silvery flower (diploied) 20.553
CNS0095600Silvery flower (diploied) 30.246
CNS0095601Golden flower (diploid) 10.437
CNS0095602Golden flower (diploid) 20.267
CNS0095603Golden flower (diploid) 30.205
CNS0095604Slightly white alabastrum(tetraploid) 13.921
CNS0095605Slightly white alabastrum(tetraploid) 22.893
CNS0095606Slightly white alabastrum(tetraploid) 34.968
CNS0095607Whole white alabastrum(tetraploid) 11.566
CNS0095608Whole white alabastrum(tetraploid) 22.336
CNS0095609Whole white alabastrum(tetraploid) 31.116
CNS0095610Silvery flower (tetraploid) 10.151
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.028
CNS0095613Golden flower (tetraploid) 11.635
CNS0095614Golden flower (tetraploid) 20.122
CNS0095615Golden flower (tetraploid) 30.731
CRA001975CRR073297Stem 10.758
CRR073298Stem 20.518
CRR073299Stem 30.891
CRR073300Leaf 11.434
CRR073301Leaf 21.938
CRR073302Leaf 32.397
CRR073303Juvenile bud 10.678
CRR073304Juvenile bud 20.872
CRR073305Juvenile bud 30.712
CRR073306Third green 10.207
CRR073307Third green 20.322
CRR073308Third green 30.362
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.699
CRR073314Silver flowering 30.696
CRR073315Gold flowering 10.384
CRR073316Gold flowering 20.081
CRR073317Gold flowering 31.391
CRR073318Tawny withering 18.906
CRR073319Tawny withering 21.715
CRR073320Tawny withering 36.446