Detail information of GWHGAAZE015894


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010274306.12.2437E-70PREDICTED: uncharacterized protein LOC104609637 [Nelumbo nucifera]
trEMBLtr|I1MA31|I1MA31_SOYBN1E-69Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G23560.1}
TAIR10AT1G44760.12E-46Adenine nucleotide alpha hydrolases-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene6234464262346875+
GWHAAZE00000004mRNA6234464262346875+
GWHAAZE00000004exon6234464262344908+
GWHAAZE00000004exon6234598262346103+
GWHAAZE00000004exon6234671962346875+
GWHAAZE00000004CDS6234464262344908+
GWHAAZE00000004CDS6234598262346103+
GWHAAZE00000004CDS6234671962346875+
Transcript Sequence

Network for GWHGAAZE015894

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0090


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00582.27Usp11522.00E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.472
SRR3591706second leaf6.689
SRR3591707mature leaf0.000
SRR3591708Shoot apex24.236
SRR3591709Stem0.597
SRR3591710White floral bud3.009
SRR3591711White flower1.184
SRR3591712Green floral bud16.591
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 17.679
SRR8316896Juvenile bud stage 17.606
SRR8316897Juvenile bud stage 18.960
SRR8316894Third green stage 5.937
SRR8316900Third green stage 10.689
SRR8316901Third green stage 5.439
SRR8316898Complete white stage 0.328
SRR8316899Complete white stage 9.330
SRR8316903Complete white stage 1.126
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.703
SRP132670SRR6706286Control5.917
SRR6706287Light intensity 50%7.946
SRR6706288Light intensity 20%6.392
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.753
CNS0095593Slightly white alabastrum(diploid) 216.896
CNS0095594Slightly white alabastrum(diploid) 312.712
CNS0095595Whole white alabastrum(diploid) 27.218
CNS0095596Whole white alabastrum(diploid) 33.392
CNS0095597Whole white alabastrum(diploid) 42.854
CNS0095598Silvery flower (diploied) 110.692
CNS0095599Silvery flower (diploied) 213.882
CNS0095600Silvery flower (diploied) 32.181
CNS0095601Golden flower (diploid) 111.058
CNS0095602Golden flower (diploid) 26.121
CNS0095603Golden flower (diploid) 36.039
CNS0095604Slightly white alabastrum(tetraploid) 159.209
CNS0095605Slightly white alabastrum(tetraploid) 245.758
CNS0095606Slightly white alabastrum(tetraploid) 3125.466
CNS0095607Whole white alabastrum(tetraploid) 115.100
CNS0095608Whole white alabastrum(tetraploid) 26.281
CNS0095609Whole white alabastrum(tetraploid) 325.773
CNS0095610Silvery flower (tetraploid) 10.501
CNS0095611Silvery flower (tetraploid) 24.852
CNS0095612Silvery flower (tetraploid) 31.240
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.245
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 136.392
CRR073298Stem 235.128
CRR073299Stem 334.086
CRR073300Leaf 124.926
CRR073301Leaf 223.473
CRR073302Leaf 338.122
CRR073303Juvenile bud 111.909
CRR073304Juvenile bud 23.410
CRR073305Juvenile bud 38.436
CRR073306Third green 10.044
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.179
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.032
CRR073316Gold flowering 22.025
CRR073317Gold flowering 31.477
CRR073318Tawny withering 13.423
CRR073319Tawny withering 24.399
CRR073320Tawny withering 33.267