Detail information of GWHGAAZE015915


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007019090.12.5581E-106Caffeic acid 3-O-methyltransferase 1 [Theobroma cacao]
Swissprottr|Q8W013|COMT1_CATRO9E-80Caffeic acid 3-O-methyltransferase
trEMBLtr|A0A061FG56|A0A061FG56_THECC1E-106Caffeic acid 3-O-methyltransferase 1 {ECO:0000313|EMBL:EOY16315.1}
TAIR10AT5G54160.13E-57O-methyltransferase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene6289060662897755-
GWHAAZE00000004mRNA6289060662897755-
GWHAAZE00000004exon6289764362897755-
GWHAAZE00000004exon6289256662892876-
GWHAAZE00000004exon6289060662890862-
GWHAAZE00000004CDS6289764362897755-
GWHAAZE00000004CDS6289256662892876-
GWHAAZE00000004CDS6289060662890862-
Transcript Sequence

Network for GWHGAAZE015915

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00891.19Methyltransf_2391409.40E-28
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13066E2.1.1.68, COMT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0008171molecular_functionO-methyltransferase activity
GO:0008168molecular_functionmethyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.122
SRR3591708Shoot apex0.000
SRR3591709Stem0.363
SRR3591710White floral bud1.810
SRR3591711White flower3.324
SRR3591712Green floral bud1.578
SRR3591713Yellow flower1.069
SRP173429 SRR8316895Juvenile bud stage 0.345
SRR8316896Juvenile bud stage 0.243
SRR8316897Juvenile bud stage 0.550
SRR8316894Third green stage 0.047
SRR8316900Third green stage 0.577
SRR8316901Third green stage 0.535
SRR8316898Complete white stage 0.178
SRR8316899Complete white stage 1.256
SRR8316903Complete white stage 0.587
SRR8316902Silver flowering stage0.668
SRR8316904Silver flowering stage0.926
SRR8316905Silver flowering stage0.456
SRR8316906Gold flowering stage 2.668
SRR8316907Gold flowering stage 2.198
SRR8316908Gold flowering stage 5.241
SRP132670SRR6706286Control0.152
SRR6706287Light intensity 50%0.280
SRR6706288Light intensity 20%0.096
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.385
CNS0095593Slightly white alabastrum(diploid) 20.236
CNS0095594Slightly white alabastrum(diploid) 31.341
CNS0095595Whole white alabastrum(diploid) 21.061
CNS0095596Whole white alabastrum(diploid) 30.240
CNS0095597Whole white alabastrum(diploid) 40.990
CNS0095598Silvery flower (diploied) 11.047
CNS0095599Silvery flower (diploied) 20.254
CNS0095600Silvery flower (diploied) 30.783
CNS0095601Golden flower (diploid) 10.928
CNS0095602Golden flower (diploid) 20.303
CNS0095603Golden flower (diploid) 30.532
CNS0095604Slightly white alabastrum(tetraploid) 12.719
CNS0095605Slightly white alabastrum(tetraploid) 21.641
CNS0095606Slightly white alabastrum(tetraploid) 30.368
CNS0095607Whole white alabastrum(tetraploid) 12.653
CNS0095608Whole white alabastrum(tetraploid) 22.875
CNS0095609Whole white alabastrum(tetraploid) 31.776
CNS0095610Silvery flower (tetraploid) 11.328
CNS0095611Silvery flower (tetraploid) 20.315
CNS0095612Silvery flower (tetraploid) 31.111
CNS0095613Golden flower (tetraploid) 10.515
CNS0095614Golden flower (tetraploid) 20.384
CNS0095615Golden flower (tetraploid) 30.851
CRA001975CRR073297Stem 10.147
CRR073298Stem 20.188
CRR073299Stem 30.295
CRR073300Leaf 10.292
CRR073301Leaf 20.353
CRR073302Leaf 30.132
CRR073303Juvenile bud 10.324
CRR073304Juvenile bud 20.196
CRR073305Juvenile bud 30.229
CRR073306Third green 10.746
CRR073307Third green 21.722
CRR073308Third green 30.866
CRR073309Second white 10.691
CRR073310Second white 21.018
CRR073311Second white 31.181
CRR073312Silver flowering 11.413
CRR073313Silver flowering 20.611
CRR073314Silver flowering 31.105
CRR073315Gold flowering 10.509
CRR073316Gold flowering 20.344
CRR073317Gold flowering 30.276
CRR073318Tawny withering 10.168
CRR073319Tawny withering 20.072
CRR073320Tawny withering 30.046