Detail information of GWHGAAZE016118


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002266195.12.8178E-162PREDICTED: trihelix transcription factor GT-2-like [Vitis vinifera]
Swissprottr|Q39117|TGT2_ARATH5E-129Trihelix transcription factor GT-2
trEMBLtr|F6GY30|F6GY30_VITVI4E-157Putative uncharacterized protein {ECO:0000313|EMBL:CCB44866.1}
TAIR10AT1G76890.25E-89Duplicated homeodomain-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene6963504169637412+
GWHAAZE00000004mRNA6963504169637412+
GWHAAZE00000004exon6963504169635261+
GWHAAZE00000004exon6963584769636278+
GWHAAZE00000004exon6963636169636638+
GWHAAZE00000004exon6963676669637412+
GWHAAZE00000004CDS6963504169635261+
GWHAAZE00000004CDS6963584769636278+
GWHAAZE00000004CDS6963636169636638+
GWHAAZE00000004CDS6963676669637412+
Transcript Sequence

Network for GWHGAAZE016118

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.7Myb_DNA-bind_4381241.20E-18
PF13837.7Myb_DNA-bind_43354212.30E-22
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf30.862
SRR3591706second leaf31.178
SRR3591707mature leaf31.687
SRR3591708Shoot apex26.642
SRR3591709Stem16.224
SRR3591710White floral bud69.755
SRR3591711White flower29.690
SRR3591712Green floral bud83.271
SRR3591713Yellow flower14.073
SRP173429 SRR8316895Juvenile bud stage 27.270
SRR8316896Juvenile bud stage 24.855
SRR8316897Juvenile bud stage 17.584
SRR8316894Third green stage 19.002
SRR8316900Third green stage 57.802
SRR8316901Third green stage 60.377
SRR8316898Complete white stage 30.237
SRR8316899Complete white stage 103.066
SRR8316903Complete white stage 63.888
SRR8316902Silver flowering stage12.209
SRR8316904Silver flowering stage17.275
SRR8316905Silver flowering stage7.502
SRR8316906Gold flowering stage 17.523
SRR8316907Gold flowering stage 19.622
SRR8316908Gold flowering stage 26.459
SRP132670SRR6706286Control110.237
SRR6706287Light intensity 50%110.100
SRR6706288Light intensity 20%110.567
CNP0000432CNS0095592Slightly white alabastrum(diploid) 128.401
CNS0095593Slightly white alabastrum(diploid) 237.243
CNS0095594Slightly white alabastrum(diploid) 325.528
CNS0095595Whole white alabastrum(diploid) 238.675
CNS0095596Whole white alabastrum(diploid) 331.651
CNS0095597Whole white alabastrum(diploid) 440.823
CNS0095598Silvery flower (diploied) 142.197
CNS0095599Silvery flower (diploied) 229.051
CNS0095600Silvery flower (diploied) 334.403
CNS0095601Golden flower (diploid) 126.258
CNS0095602Golden flower (diploid) 230.380
CNS0095603Golden flower (diploid) 330.350
CNS0095604Slightly white alabastrum(tetraploid) 135.654
CNS0095605Slightly white alabastrum(tetraploid) 228.717
CNS0095606Slightly white alabastrum(tetraploid) 368.816
CNS0095607Whole white alabastrum(tetraploid) 118.107
CNS0095608Whole white alabastrum(tetraploid) 215.632
CNS0095609Whole white alabastrum(tetraploid) 341.768
CNS0095610Silvery flower (tetraploid) 123.935
CNS0095611Silvery flower (tetraploid) 223.330
CNS0095612Silvery flower (tetraploid) 350.847
CNS0095613Golden flower (tetraploid) 120.022
CNS0095614Golden flower (tetraploid) 220.055
CNS0095615Golden flower (tetraploid) 312.165
CRA001975CRR073297Stem 197.146
CRR073298Stem 297.042
CRR073299Stem 385.086
CRR073300Leaf 1132.822
CRR073301Leaf 2127.422
CRR073302Leaf 396.749
CRR073303Juvenile bud 1148.804
CRR073304Juvenile bud 2122.489
CRR073305Juvenile bud 3191.367
CRR073306Third green 152.315
CRR073307Third green 243.004
CRR073308Third green 356.353
CRR073309Second white 128.813
CRR073310Second white 242.878
CRR073311Second white 329.775
CRR073312Silver flowering 123.537
CRR073313Silver flowering 224.059
CRR073314Silver flowering 331.220
CRR073315Gold flowering 136.217
CRR073316Gold flowering 248.051
CRR073317Gold flowering 322.520
CRR073318Tawny withering 116.054
CRR073319Tawny withering 211.479
CRR073320Tawny withering 39.666